Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0594
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 290 6e-79
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 289 1e-78
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 279 1e-75
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.80
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.1
07_03_1509 - 27246721-27247350 29 2.4
03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419 29 4.2
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 29 4.2
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.6
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 28 7.4
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.8
09_06_0319 - 22293869-22293906,22294539-22295808 27 9.8
08_02_0567 + 18769742-18769790,18769928-18771351 27 9.8
06_02_0084 - 11547820-11548773 27 9.8
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 290 bits (712), Expect = 6e-79
Identities = 139/218 (63%), Positives = 163/218 (74%), Gaps = 6/218 (2%)
Frame = +1
Query: 16 RVTL*RSPWGAGQRDATGTAR------DKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDF 177
RV L SP A TG R +KPYPKSR+CRGVPDPKIRIFD+G+K+ + DDF
Sbjct: 294 RVRLGESPTHALSAQLTGPVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDF 353
Query: 178 PLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCA 357
PLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R+ HP+HV+RINKMLSCA
Sbjct: 354 PLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCA 413
Query: 358 GADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIY 537
GADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A EALRRAKFKFPGRQ++
Sbjct: 414 GADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVI 473
Query: 538 VSKKWGFTKYERDEFEKLREEGRLANDGCIVQYPPEHG 651
S KWGFT+++RDE+ KL+ EGR+ DG + HG
Sbjct: 474 FSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAKLLTRHG 511
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 289 bits (710), Expect = 1e-78
Identities = 132/192 (68%), Positives = 155/192 (80%)
Frame = +1
Query: 76 RDKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 255
++KPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI C
Sbjct: 13 KNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIAC 72
Query: 256 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIG 435
NKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IG
Sbjct: 73 NKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIG 132
Query: 436 QPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLAN 615
Q ++SVR + EALRRAKFKFPGRQKI S+KWGFTK+ R+E+ KL+ EGR+ +
Sbjct: 133 QVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMS 192
Query: 616 DGCIVQYPPEHG 651
DG Q HG
Sbjct: 193 DGVNAQLLGSHG 204
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 39 MGRRPARCYRYCK 77
MGRRPARCYR K
Sbjct: 1 MGRRPARCYRQIK 13
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 279 bits (684), Expect = 1e-75
Identities = 126/182 (69%), Positives = 149/182 (81%)
Frame = +1
Query: 76 RDKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 255
++KPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI C
Sbjct: 9 KNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIAC 68
Query: 256 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIG 435
NKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IG
Sbjct: 69 NKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIG 128
Query: 436 QPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLAN 615
Q ++SVR EALRRAKFKFPGRQKI S+KWGFTK+ RDE+ +L+ EGR+
Sbjct: 129 QVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMP 188
Query: 616 DG 621
DG
Sbjct: 189 DG 190
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 163 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 282
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 443 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 351
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>07_03_1509 - 27246721-27247350
Length = 209
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 431 LDSPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 559
L P PC RH RL +P +SSSP+++R+T R+G S
Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179
>03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419
Length = 464
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -2
Query: 261 LIAADTSCLQSL*AQLFIFVGHQVHAQWKVVNGRSLLTQIEDTDLGIRYTPTEPRFR--I 88
L AA +Q+L A ++ VN ++L Q + G + P+ +
Sbjct: 131 LAAALLPAMQNLRAAAAAAGDGAARIKFSTVNTMAVLAQSDPPSTGAFHPDISPQLTQIL 190
Query: 87 RFISCSTGSISLAGAPW*SLQSDPRAEFL 1
F+S +T + P+ + QSDPR E L
Sbjct: 191 GFLSKTTAPFMINPYPYFAYQSDPRPETL 219
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -3
Query: 236 SKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTPRQNLDFGYGLSLAVPVAS 57
++A EL + S S + +L LP +++ LG T +D ++ P+A
Sbjct: 86 TRADELIVNVGSCNHFQISQEGPVSSLLLPLTEMEELGEHTATVAIDLQLISAVEAPLAK 145
Query: 56 RWPAPHGDLY 27
W +GD++
Sbjct: 146 GWGYGYGDIH 155
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 397 GKPQGTVARVRIGQPIMSVRSSD 465
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 79 DKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSE 228
D P P S G PD +++F R D P ++VS +Y+ SS+
Sbjct: 1051 DDPSPGSFSFGGDPDTFLQVFIWNGTRPVSRDGPWTGYMVSSQYQANSSD 1100
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 269 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 168
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 397 GKPQGTVARVRIGQPIMSVRSSD 465
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +1
Query: 382 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 534
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 346 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 474
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,753,648
Number of Sequences: 37544
Number of extensions: 484585
Number of successful extensions: 1432
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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