Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0593
(362 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 44 5e-05
03_02_0800 + 11337206-11337532,11337634-11337957,11338060-113381... 43 6e-05
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 43 9e-05
07_03_1743 - 29167078-29167290,29167389-29168159 40 6e-04
03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555 37 0.004
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 36 0.010
04_04_0516 + 25833801-25834046,25834412-25834532,25834636-258348... 35 0.017
02_05_0007 + 24918163-24918420,24919360-24919410,24919411-249194... 33 0.091
06_02_0308 + 14124373-14124706,14124888-14124910 31 0.37
08_02_1243 - 25527523-25527960,25527993-25528604 30 0.49
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821... 30 0.64
01_02_0040 - 10496431-10496463,10497278-10498708 28 2.6
02_01_0110 + 819022-819264,819996-820761,820846-820920,821276-82... 27 3.4
08_02_0707 - 20212190-20214592 27 4.5
06_01_0731 + 5380500-5380631,5380717-5380767,5381844-5381889,538... 26 7.9
04_03_0860 + 20377577-20377948,20378440-20378505,20379411-203794... 26 7.9
03_05_0932 + 28924891-28924935,28925982-28926062,28926464-289265... 26 7.9
>05_04_0376 -
20754386-20755392,20755683-20756320,20756433-20756627,
20757730-20757795,20757942-20758007,20758402-20758445
Length = 671
Score = 43.6 bits (98), Expect = 5e-05
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
GA+ A S+R+AGS V L+ T+S+ R L A +V + + + A A +
Sbjct: 362 GAISAAQSIRQAGSTRDLVILVDDTISDHHRKGLEAAGWKVRVIQRIRNPKAERDAYNE- 420
Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
++K W LT Y+K +F+DA
Sbjct: 421 ----WNYSKFRLWQLTDYDKIIFIDA 442
>03_02_0800 +
11337206-11337532,11337634-11337957,11338060-11338194,
11338280-11338519
Length = 341
Score = 43.2 bits (97), Expect = 6e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD-VLDSRDAAHLALLQ 279
G + LA LR+ GS YP V + P V E+ R L + V ++ V + A+
Sbjct: 38 GVVGLAKGLRKVGSAYPLVVAVLPDVPESHRRILISQGCIVREIEPVYPPENQTQFAMAY 97
Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
I ++K+ W +YE+ V+LDA
Sbjct: 98 YV---INYSKLRIWEFVEYERMVYLDA 121
>01_06_1550 +
38191957-38192054,38193084-38193284,38193456-38194090,
38194398-38195419
Length = 651
Score = 42.7 bits (96), Expect = 9e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +1
Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
GA+ A S+R+AGS V L+ T+S R L A +V + + + A A +
Sbjct: 337 GAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEAAGWKVRIIQRIRNPKAERDAYNE- 395
Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
++K W LT Y+K +F+DA
Sbjct: 396 ----WNYSKFRLWQLTDYDKIIFIDA 417
>07_03_1743 - 29167078-29167290,29167389-29168159
Length = 327
Score = 39.9 bits (89), Expect = 6e-04
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL---RAVFSEVVTVDVLDSRDAAHLAL 273
G + LA LRR S YP V + P V R +L V E+ V +S+ +A
Sbjct: 33 GVVGLAKGLRRVRSAYPLVVAVLPDVPGEHRRKLVEQGCVVREIQPVYPPESQTQFAMAY 92
Query: 274 LQRPELGITFTKIHCWNLTQYEKCVFLDA 360
I ++K+ W +YE+ V+LDA
Sbjct: 93 YV-----INYSKLRIWEFVEYERMVYLDA 116
>03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555
Length = 614
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +1
Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
GA+VLA S+RRAGS V L TVS+ L A + + + A +
Sbjct: 339 GAIVLAQSIRRAGSTRDLVLLHDHTVSKPALAALVAAGWTPRKIKRIRNPRAERGTYNE- 397
Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
++K W LT Y++ VF+DA
Sbjct: 398 ----YNYSKFRLWQLTDYDRVVFVDA 419
>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
Length = 654
Score = 35.9 bits (79), Expect = 0.010
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Frame = +1
Query: 85 KRLLRLGALVLAHSLRRAG-SVYPA------VALITPTVSEAMRDRLRAVFSEVVTVDVL 243
+ L GALV A S+R A S P+ VAL+ T+S R L A +V + +
Sbjct: 324 EELYACGALVAAQSIRMASASGAPSEPERDMVALVDETISARHRGALEAAGWKVRAIRRV 383
Query: 244 DSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDA 360
+ AA A + ++K W+LT+Y++ VFLDA
Sbjct: 384 RNPRAAADAYNEW-----NYSKFWLWSLTEYDRVVFLDA 417
>04_04_0516 +
25833801-25834046,25834412-25834532,25834636-25834821,
25834918-25834944,25836203-25836351,25836553-25836602,
25837181-25837289,25837395-25837532,25838184-25838463,
25838533-25838656,25838994-25839003
Length = 479
Score = 35.1 bits (77), Expect = 0.017
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 100 LGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQ 279
LG VL S+R G+ V L++ VS+ R L+A V + +L + +
Sbjct: 47 LGVRVLGKSIRDTGTRRDLVVLVSDGVSDYSRKLLQADGWIVSHITLLANPNQVR----P 102
Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
+ G+ +TK+ +N+T Y K V+LDA
Sbjct: 103 KRFWGV-YTKLKIFNMTSYRKVVYLDA 128
>02_05_0007 +
24918163-24918420,24919360-24919410,24919411-24919480,
24919645-24919830,24920127-24920275,24921310-24921417,
24921501-24921638,24922574-24922853,24922924-24923047,
24923197-24923312,24923612-24923619
Length = 495
Score = 32.7 bits (71), Expect = 0.091
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +1
Query: 100 LGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQ 279
LG VL S+R + V L++ VSE R L A V + +L A+ ++
Sbjct: 51 LGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLL-----ANPNQVR 105
Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
+TK+ +N+T Y+K +LDA
Sbjct: 106 PTRFWGVYTKLKIFNMTSYKKVAYLDA 132
>06_02_0308 + 14124373-14124706,14124888-14124910
Length = 118
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 76 SGH-KRLLRLGALVLAHSLRRAGSVYPAVALITPTVSEA-MRDRLRAVF 216
+GH +R R +LVL L+ G + VA + P +SEA +R R +A+F
Sbjct: 14 AGHLRRRCRGRSLVLLQQLQLLGVLVVVVAGVAPGISEAQVRSRFKAIF 62
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +2
Query: 47 FIMSNRAWVTLGTNDSYAWELWCWPIRSAAPVRCTLP*HSSHLP 178
F++ + W+T S + WC P AP C+ P S P
Sbjct: 66 FVLYHGCWMTQQAATSVSLPRWCTPSSRGAPTMCSSPPTQSAAP 109
>10_08_0883 +
21279913-21280235,21281066-21281327,21281998-21282199,
21282289-21282436,21282541-21283084
Length = 492
Score = 29.9 bits (64), Expect = 0.64
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 112 VLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSE----VVTVDVLDSRDAAHLALLQ 279
V+ SL R G+ V + + V D +RA+ E VV V+ + + ++L +
Sbjct: 78 VMMRSLARIGADADRVLIASADVPA---DWVRAMREEDGMRVVLVENMKNPYESNLGGIN 134
Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
R +T K++ W L YE+ V +D+
Sbjct: 135 R-RFKLTLNKLYAWTLVDYERVVMIDS 160
>01_02_0040 - 10496431-10496463,10497278-10498708
Length = 487
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -2
Query: 151 GTPNRRGGANGPAPELPSV----GVVCAQSYPCSI*HYEAGCSLV 29
G N +G NGPAP P V+ A H+EAG + V
Sbjct: 22 GYGNGKGNGNGPAPRPPPAKRPRSVISAAQIRAEFEHHEAGVARV 66
>02_01_0110 +
819022-819264,819996-820761,820846-820920,821276-821445,
821644-821742,821835-822134,822211-822318,822443-822514,
822580-822666,822887-822958,823063-823152,823795-823902,
824015-824083,824177-824242,824395-824418
Length = 782
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 157 VALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDA----AHLALLQRPELGI 297
V+L PT+ ++ D L++ + +D+ +D A+++LLQ+PEL +
Sbjct: 255 VSLRKPTIHQSDDDELKSKLNLKPNIDLKMRKDMDEDLANISLLQKPELSV 305
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 RLEVT*TVTRDYTRLHNVKSSMGNSGHKRLLRLGAL-VLAHSLRRAGSVYPAVALITPTV 180
R T T TRLH+ SS + RLL L +L +LA + R S +P++ + +
Sbjct: 24 RFPTTPLPTPSKTRLHHPSSSPYAAALLRLLALHSLFLLAPAARAPASSFPSLPPLLALL 83
Query: 181 SEAM 192
S A+
Sbjct: 84 SAAV 87
>06_01_0731 +
5380500-5380631,5380717-5380767,5381844-5381889,
5383356-5383495
Length = 122
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 297 HLHKDPLLEPHSVREMRIPRC 359
HLH+DP + P + R PRC
Sbjct: 16 HLHRDPTMNP-GLGSARCPRC 35
>04_03_0860 +
20377577-20377948,20378440-20378505,20379411-20379492,
20380142-20380362
Length = 246
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 273 EGQVSRVS*VQNVYRDYFGENCAKTIPHSFTDGRCDECYGRVHRTG 136
EGQ S + ++ Y E +P+S G C C G+V G
Sbjct: 66 EGQESVIKVPEDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVEGG 111
>03_05_0932 +
28924891-28924935,28925982-28926062,28926464-28926512,
28926599-28926677,28926762-28926921,28927307-28927440,
28927814-28927882,28928064-28928151,28928396-28928471,
28929267-28929340,28929478-28929585,28929858-28930160,
28930483-28930587,28930670-28930750,28930838-28931852,
28932086-28932201
Length = 860
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 47 FIMSNRAWVTLGTNDSYAWELWCWPIRSAAPVRCTLP*HS 166
F +S W L D Y ++WC + P R P HS
Sbjct: 217 FPLSRANWEML-QKDEYDLQVWCILFNDSVPFRMQWPLHS 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,083,765
Number of Sequences: 37544
Number of extensions: 167691
Number of successful extensions: 601
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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