Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0593
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   3.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   8.1  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    22   8.1  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    22   8.1  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 90   SFVPRVTHARFDI 52
            SF+P  TH R DI
Sbjct: 1464 SFIPSTTHGRIDI 1476


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 15  DLNCHTRLHPAS*CQ 59
           DLN HT L P   C+
Sbjct: 96  DLNSHTELKPLDVCE 110


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 149 YTEPARRSEWASTRAPKRRSRLCP 78
           YTE +RR     T   K +  +CP
Sbjct: 274 YTEVSRRGGEEETELKKPKKPICP 297


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 139 GSVYPAVALITPTVSE 186
           G++YPA A + PT  E
Sbjct: 71  GNIYPAGAKLAPTEQE 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,791
Number of Sequences: 2352
Number of extensions: 6436
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)