Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0593
         (362 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p pro...   130   7e-31
AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB...   130   7e-31
AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p pro...    30   0.79 
AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17...    30   0.79 
AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA...    30   0.79 
AE014296-1975|AAS65025.1|   88|Drosophila melanogaster CG33270-P...    28   4.2  
AE014296-1976|AAS65026.1|   88|Drosophila melanogaster CG33269-P...    27   5.6  
AE014296-1974|AAS65024.1|   88|Drosophila melanogaster CG33271-P...    27   5.6  
AE014296-1960|AAS65020.1|   88|Drosophila melanogaster CG33272-P...    27   5.6  
AE014296-1957|AAS65019.1|   88|Drosophila melanogaster CG33500-P...    27   5.6  
BT028842-1|ABI34223.2|  274|Drosophila melanogaster RT01105p pro...    27   7.4  
BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro...    27   7.4  
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.      27   7.4  
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog...    27   7.4  
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P...    27   7.4  
AE014297-2157|AAF55280.1|  279|Drosophila melanogaster CG5952-PA...    27   7.4  
AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    27   9.7  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    27   9.7  

>AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p
           protein.
          Length = 333

 Score =  130 bits (313), Expect = 7e-31
 Identities = 59/87 (67%), Positives = 73/87 (83%)
 Frame = +1

Query: 100 LGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQ 279
           LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V  V+VLDS+DAA+LALL 
Sbjct: 17  LGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLDSQDAANLALLS 76

Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
           RPELG+TFTK+HCW L Q+EKCVFLDA
Sbjct: 77  RPELGVTFTKLHCWRLVQFEKCVFLDA 103



 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 53  MSNRAWVTLGTNDSYA 100
           MS  AWVTL TND+Y+
Sbjct: 1   MSKFAWVTLTTNDTYS 16


>AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB,
           isoform B protein.
          Length = 333

 Score =  130 bits (313), Expect = 7e-31
 Identities = 59/87 (67%), Positives = 73/87 (83%)
 Frame = +1

Query: 100 LGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQ 279
           LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V  V+VLDS+DAA+LALL 
Sbjct: 17  LGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLDSQDAANLALLS 76

Query: 280 RPELGITFTKIHCWNLTQYEKCVFLDA 360
           RPELG+TFTK+HCW L Q+EKCVFLDA
Sbjct: 77  RPELGVTFTKLHCWRLVQFEKCVFLDA 103



 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 53  MSNRAWVTLGTNDSYA 100
           MS  AWVTL TND+Y+
Sbjct: 1   MSKFAWVTLTTNDTYS 16


>AY122071-1|AAM52583.1|  312|Drosophila melanogaster AT15262p
           protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +1

Query: 97  RLGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLAL 273
           R+GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L
Sbjct: 159 RIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDL 216

Query: 274 LQRPELGITFTKIHCWNLTQYEKCV 348
           + RPEL   F+  HC +L ++E CV
Sbjct: 217 MSRPEL--LFSPTHCVDLQRFEACV 239


>AL121806-3|CAB58079.1|  312|Drosophila melanogaster EG:BACR42I17.2
           protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +1

Query: 97  RLGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLAL 273
           R+GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L
Sbjct: 159 RIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDL 216

Query: 274 LQRPELGITFTKIHCWNLTQYEKCV 348
           + RPEL   F+  HC +L ++E CV
Sbjct: 217 MSRPEL--LFSPTHCVDLQRFEACV 239


>AE014298-154|AAF45586.1|  312|Drosophila melanogaster CG11378-PA
           protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +1

Query: 97  RLGALVLAHSLRRAGS-VYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLAL 273
           R+GA VL  +  R G  +   +A   P   EA ++ +    ++     +   +D     L
Sbjct: 159 RIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLNQSFHQYI--PKDGQVPDL 216

Query: 274 LQRPELGITFTKIHCWNLTQYEKCV 348
           + RPEL   F+  HC +L ++E CV
Sbjct: 217 MSRPEL--LFSPTHCVDLQRFEACV 239


>AE014296-1975|AAS65025.1|   88|Drosophila melanogaster CG33270-PA
           protein.
          Length = 88

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 233 TVTTSEKTARRRSLIASLTVGVMSATAGYTEPA-RRSEWASTRAPKRRSR 87
           T TT++ T    +  A+ T    +A++ + +   R + W  TR PKR+ +
Sbjct: 22  TTTTTDATTTTTTTTAASTTTTTTASSTHKKLCWRGNNWCHTRIPKRKCK 71


>AE014296-1976|AAS65026.1|   88|Drosophila melanogaster CG33269-PA
           protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 233 TVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKRRSR 87
           T TT   T    +  AS T    +A+       R + W  TR PKR+ +
Sbjct: 23  TTTTDATTTTTTTTAASTTTTTTAASTHKKLCWRGNNWCHTRIPKRKCK 71


>AE014296-1974|AAS65024.1|   88|Drosophila melanogaster CG33271-PA
           protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 233 TVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKRRSR 87
           T TT   T    +  AS T    +A+       R + W  TR PKR+ +
Sbjct: 23  TTTTDATTTTTTTTAASTTTTTTAASTHKKLCWRGNNWCHTRIPKRKCK 71


>AE014296-1960|AAS65020.1|   88|Drosophila melanogaster CG33272-PA
           protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 233 TVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKRRSR 87
           T TT   T    +  AS T    +A+       R + W  TR PKR+ +
Sbjct: 23  TTTTDATTTTTTTTAASTTTTTTAASTHKKLCWRGNNWCHTRIPKRKCK 71


>AE014296-1957|AAS65019.1|   88|Drosophila melanogaster CG33500-PA
           protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 233 TVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKRRSR 87
           T TT   T    +  AS T    +A+       R + W  TR PKR+ +
Sbjct: 23  TTTTDATTTTTTTTAASTTTTTTAASTHKKLCWRGNNWCHTRIPKRKCK 71


>BT028842-1|ABI34223.2|  274|Drosophila melanogaster RT01105p
           protein.
          Length = 274

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 133 GGANGPAPELPSVGVVCAQSY 71
           GGA GP P   SVG   A SY
Sbjct: 125 GGAGGPNPGYGSVGAATASSY 145


>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 230  VTTSEKTARRRSLIASLTV-GVMSATAGYTEPARRSEWASTRAPKRRSRLCPELPMLD 60
            VTT   T    +  +SL+  G  S+T+G    +  S  +S   P+    L PE+  LD
Sbjct: 931  VTTGTSTTTTTTASSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSLSPEIQTLD 988


>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 230  VTTSEKTARRRSLIASLTV-GVMSATAGYTEPARRSEWASTRAPKRRSRLCPELPMLD 60
            VTT   T    +  +SL+  G  S+T+G    +  S  +S   P+    L PE+  LD
Sbjct: 931  VTTGTSTTTTTTASSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSLSPEIQTLD 988


>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
            protein.
          Length = 1061

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 230  VTTSEKTARRRSLIASLTV-GVMSATAGYTEPARRSEWASTRAPKRRSRLCPELPMLD 60
            VTT   T    +  +SL+  G  S+T+G    +  S  +S   P+    L PE+  LD
Sbjct: 931  VTTGTSTTTTTTASSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSLSPEIQTLD 988


>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
            protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 230  VTTSEKTARRRSLIASLTV-GVMSATAGYTEPARRSEWASTRAPKRRSRLCPELPMLD 60
            VTT   T    +  +SL+  G  S+T+G    +  S  +S   P+    L PE+  LD
Sbjct: 931  VTTGTSTTTTTTASSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSLSPEIQTLD 988


>AE014297-2157|AAF55280.1|  279|Drosophila melanogaster CG5952-PA
           protein.
          Length = 279

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 133 GGANGPAPELPSVGVVCAQSY 71
           GGA GP P   SVG   A SY
Sbjct: 125 GGAGGPNPGYGSVGAATASSY 145


>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -3

Query: 183 TDGRCDECYGRVHRTGAAERMGQHQSSQA*ESFVPRVTH--ARF-DIMKPGVVSCDS 22
           ++  C++ YG V  T    R    +SS   +S  P VTH  AR   ++  G V C S
Sbjct: 189 SNSECEQSYGTVASTDMCTRRTDGKSSCGGDSGGPLVTHDNARLVGVITFGSVDCHS 245


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -3

Query: 183 TDGRCDECYGRVHRTGAAERMGQHQSSQA*ESFVPRVTH--ARF-DIMKPGVVSCDS 22
           ++  C++ YG V  T    R    +SS   +S  P VTH  AR   ++  G V C S
Sbjct: 189 SNSECEQSYGTVASTDMCTRRTDGKSSCGGDSGGPLVTHDNARLVGVITFGSVDCHS 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,939,263
Number of Sequences: 53049
Number of extensions: 277018
Number of successful extensions: 891
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)