Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0593
         (362 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64599-6|AAL11464.1|  284|Caenorhabditis elegans Unidentified vi...   102   7e-23
U64599-5|AAM69110.1|  303|Caenorhabditis elegans Unidentified vi...   102   7e-23
U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified vi...   102   7e-23
Z82052-1|CAB04823.1|  300|Caenorhabditis elegans Hypothetical pr...    95   2e-20
AL132862-24|CAB60560.1|  173|Caenorhabditis elegans Hypothetical...    40   7e-04
AF047656-1|AAC05110.1|  230|Caenorhabditis elegans Lysozyme prot...    29   1.00 
Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya bind...    27   5.3  

>U64599-6|AAL11464.1|  284|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform b
           protein.
          Length = 284

 Score =  102 bits (245), Expect = 7e-23
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = +1

Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
           GALVL HSLR AG+      LI+  VS  +R +L   F +V  VDV +S D+ +L L++R
Sbjct: 17  GALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIER 76

Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
           P+LG+TFTK+HCW LTQY KCVFLDA
Sbjct: 77  PDLGVTFTKLHCWRLTQYTKCVFLDA 102



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 59  NRAWVTLGTNDSYA 100
           + AW+TL TND+YA
Sbjct: 2   SEAWITLATNDNYA 15


>U64599-5|AAM69110.1|  303|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform c
           protein.
          Length = 303

 Score =  102 bits (245), Expect = 7e-23
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = +1

Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
           GALVL HSLR AG+      LI+  VS  +R +L   F +V  VDV +S D+ +L L++R
Sbjct: 17  GALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIER 76

Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
           P+LG+TFTK+HCW LTQY KCVFLDA
Sbjct: 77  PDLGVTFTKLHCWRLTQYTKCVFLDA 102



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 59  NRAWVTLGTNDSYA 100
           + AW+TL TND+YA
Sbjct: 2   SEAWITLATNDNYA 15


>U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform a
           protein.
          Length = 429

 Score =  102 bits (245), Expect = 7e-23
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = +1

Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
           GALVL HSLR AG+      LI+  VS  +R +L   F +V  VDV +S D+ +L L++R
Sbjct: 17  GALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVDVFNSNDSDNLRLIER 76

Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
           P+LG+TFTK+HCW LTQY KCVFLDA
Sbjct: 77  PDLGVTFTKLHCWRLTQYTKCVFLDA 102



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 59  NRAWVTLGTNDSYA 100
           + AW+TL TND+YA
Sbjct: 2   SEAWITLATNDNYA 15


>Z82052-1|CAB04823.1|  300|Caenorhabditis elegans Hypothetical
           protein T25E12.5 protein.
          Length = 300

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 43/86 (50%), Positives = 59/86 (68%)
 Frame = +1

Query: 103 GALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQR 282
           GAL L +SL  +G+      LIT  +S ++R++L   F EV  VD+ +S D+ +L+L+ R
Sbjct: 17  GALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVVDIFNSNDSENLSLIGR 76

Query: 283 PELGITFTKIHCWNLTQYEKCVFLDA 360
           P+LG+TFTK HCW LTQY K VFLDA
Sbjct: 77  PDLGVTFTKFHCWRLTQYSKAVFLDA 102



 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 65  AWVTLGTNDSYA 100
           AW+TL TND YA
Sbjct: 4   AWITLATNDRYA 15


>AL132862-24|CAB60560.1|  173|Caenorhabditis elegans Hypothetical
           protein Y73F8A.31 protein.
          Length = 173

 Score = 39.5 bits (88), Expect = 7e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)
 Frame = +1

Query: 163 LITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPELGI 297
           LIT  +S ++R+ L   F EV  VD  +S D+ +L+L+ RP+L +
Sbjct: 35  LITNEISNSVREELENKFDEVNIVDFFNSNDSENLSLIGRPDLAV 79


>AF047656-1|AAC05110.1|  230|Caenorhabditis elegans Lysozyme protein
           10 protein.
          Length = 230

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +1

Query: 28  TRDYTRLHNVKSSM-GNSGHKRLLRLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
           T D+T + NVK +  GN   K     G  + A      G ++P +A   P+ +  +++ L
Sbjct: 53  TLDHTGIQNVKHAREGNKSFKNTFVNGRKISAGLTDVDGYIFPCLASHCPSAANQVKETL 112

Query: 205 RAVFSEVVTVDVL 243
            A+ S    V  L
Sbjct: 113 DALKSAGTHVSTL 125


>Z72508-7|CAA96642.1|  336|Caenorhabditis elegans Hypothetical
           protein F28H7.11 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = -3

Query: 351 EYAFLVLSEVPAVDLCEGDAELWPLEEG------QVSRVS*VQNVYRDYFGEN 211
           E  FL    V +V  C G   LW    G      +V R+S +Q  ++DYFG +
Sbjct: 124 ERYFLPHGIVVSVIYCLGLMSLWTFIAGFLSRKNRVERLSYIQESFKDYFGRD 176


>U41535-4|AAB63407.1|  655|Caenorhabditis elegans Hypothetical
           protein F18A1.5 protein.
          Length = 655

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 273 EGQVSRVS*VQNVYRDYFGENCAKTIPHSFTDGRCDEC 160
           +  ++RV+    +YR    E C K +     D RC++C
Sbjct: 502 KAMITRVNPTNALYRGCASEGCQKKLVGENGDYRCEKC 539


>U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya binding
           family protein 2 protein.
          Length = 422

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 195 PHSFTDGRCDECYGRVHRTGA 133
           P+ F +  C+EC GR HR  A
Sbjct: 365 PYFFHNQSCEECSGRYHRQHA 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,362,087
Number of Sequences: 27780
Number of extensions: 131336
Number of successful extensions: 507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)