Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0591
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.54 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.9  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   3.8  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 29  CAPALIFKQSRI*ASDMPTPDYSVDLDLGEPPPEIQD 139
           C   L+F +  +     PT D  V   +  PPPE  D
Sbjct: 186 CPAMLVFDRRSLRCVVPPTEDCDVPSTIPPPPPEEDD 222


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 119 PPPEIQDYARQHCGEDPNTRLQAIYELRDMIY 214
           PPP  Q  A+    + PN   Q +  L ++ Y
Sbjct: 330 PPPPYQISAQPTPSQSPNQIYQPVTNLTNLTY 361


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 170 NTRLQAIYELRDMIYERGECTP 235
           N RL   Y   D I E+G+CTP
Sbjct: 35  NDRLTKNY--LDCILEKGKCTP 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,195
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)