Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0591
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0755 + 5604554-5604608,5604706-5604734,5606558-5606641,560... 35 0.035
02_03_0040 + 14262137-14262182,14262456-14262738,14262824-142629... 35 0.046
02_05_0562 - 29970207-29970224,29970290-29970364,29971083-299714... 33 0.19
10_01_0115 - 1426573-1426590,1426838-1426912,1427106-1427464,142... 31 0.76
09_02_0102 - 4295329-4295366,4295622-4295702,4295946-4296252,429... 31 0.76
01_07_0384 + 43209423-43210241 31 0.76
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 29 1.7
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 29 1.7
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 29 1.7
03_06_0559 + 34719296-34719410,34719519-34719577,34719664-347213... 29 2.3
01_01_1135 - 9003823-9004182,9004308-9004367,9004441-9004683,900... 28 5.3
11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600 27 9.3
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 27 9.3
04_04_0517 + 25841292-25842099,25842256-25842308 27 9.3
02_02_0223 - 8021040-8021247,8022275-8022367,8022808-8023059,802... 27 9.3
>02_01_0755 +
5604554-5604608,5604706-5604734,5606558-5606641,
5606728-5606781,5606958-5607035,5607753-5607806,
5608060-5608119,5608202-5608297,5608403-5608504,
5608614-5608673,5608819-5609109
Length = 320
Score = 35.1 bits (77), Expect = 0.035
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = +2
Query: 251 EFLIRFLRARNFIPQKAHRLLVNYYQFRAEN---PDLFENIHPMDLH-AIGDADIMTVPP 418
E L+RFL+AR + KAH++LV+ +R +N L I P+DL+ +I D+ ++ +
Sbjct: 37 ETLLRFLKAREWNVSKAHKMLVDSLNWRIQNEIDTVLERPIVPVDLYRSIRDSQLVGLSG 96
Query: 419 Y 421
Y
Sbjct: 97 Y 97
>02_03_0040 +
14262137-14262182,14262456-14262738,14262824-14262923,
14263027-14263293,14263378-14263455,14263552-14263653,
14263731-14263780,14263864-14263957,14264060-14264161,
14264855-14264960,14265056-14265414,14265572-14265646,
14265890-14265907
Length = 559
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 164 DPNTRLQAIYELRDMIYERGECTPHRMDDEFLIRFLRARNFIPQKAHRLLVNYYQFRAE 340
DP +QA+ R ++ H D ++RFL+AR F +KA ++ V+ Q+R E
Sbjct: 78 DPE-EVQAVDAFRQLLVLEELLPSHHDDYHMMLRFLKARKFDVEKAKQMWVDMLQWRKE 135
>02_05_0562 -
29970207-29970224,29970290-29970364,29971083-29971441,
29971572-29971713,29971906-29972025,29972139-29972216,
29972330-29972429,29972522-29972571,29972827-29972904,
29973624-29973751,29973776-29973977,29974045-29974144,
29974236-29974551,29974645-29974690,29975526-29975622,
29977254-29977258,29977643-29977708,29978631-29978690,
29979167-29979272,29979513-29979658,29980731-29980813,
29980951-29981056,29996243-29996266,29996378-29996438,
29996467-29996750,29996914-29997096
Length = 1010
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 182 QAIYELRDMIYERGECTPHRMDD-EFLIRFLRARNFIPQKAHRLLVNYYQFRAE 340
QA+ R++++ R + P R DD ++RFL+AR F +KA + + +R +
Sbjct: 501 QAVSSFREVLFAR-DMLPERHDDYHTMLRFLKARKFDVEKAAHMWADMLHWRKD 553
>10_01_0115 -
1426573-1426590,1426838-1426912,1427106-1427464,
1427551-1427656,1428091-1428207,1428319-1428420,
1428520-1428613,1428697-1428746,1429029-1429106,
1429189-1429455,1429573-1429672,1429757-1430039,
1430312-1430357
Length = 564
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 164 DPNTRLQAIYELRDMIYERGECTPHRMDD-EFLIRFLRARNFIPQKAHRLLVNYYQFRAE 340
DP +QA+ R ++ E P + DD ++RFL+AR F +KA ++ + ++R E
Sbjct: 78 DPE-EVQAVDAFRQLLILE-ELLPSQHDDYHMMLRFLKARKFDVEKAKQMWADMLRWRKE 135
>09_02_0102 -
4295329-4295366,4295622-4295702,4295946-4296252,
4296616-4296696,4296818-4296919,4297358-4297396,
4297453-4297548,4297624-4297683,4297942-4297995,
4298230-4298307,4298577-4298630,4298705-4298788,
4300457-4300485,4300666-4300720
Length = 385
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +2
Query: 257 LIRFLRARNFIPQKAHRLLVNYYQFRAEN---PDLFENIHPMDLH 382
L+RFL+AR + KAH++L++ +R +N L + I P DL+
Sbjct: 39 LVRFLKAREWNVPKAHKMLMDCLNWRIQNGIDSVLAKPIVPSDLY 83
>01_07_0384 + 43209423-43210241
Length = 272
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 230 YIHRAHKSCPLVRRWLEVEYWGPRRNADERSLGSLAGARRGPSPRCNPESA 78
YIHRA + +WG +A L L A +GP+PR P +
Sbjct: 158 YIHRAGTNLTPSAACCTCAFWGYYPDAQAVKLQELVWAEKGPAPRRRPRQS 208
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 437 RRLIIYKFGNWDPKTICVEEL 499
RRLII + +WDP +C++E+
Sbjct: 126 RRLIIREIRHWDPDLVCLQEV 146
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 29.5 bits (63), Expect = 1.7
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +2
Query: 179 LQAIYELRDMIYERGECTPHRMDD-EFLIRFLRARNFIPQKAHRLLVNYYQFRAENPDLF 355
LQA+ R + + + P + DD ++RFL+AR F +KA + + ++R E
Sbjct: 191 LQAVDAFRQCLVDE-DLLPQQHDDYHTMLRFLKARKFDVEKAKSMWSDMLKWRKEFG--A 247
Query: 356 ENIHPMDLHAIGDADIMTVPP--YRGPD--GRRLIIYKFGNWD 472
+NI D + D ++M P Y G D GR + I G D
Sbjct: 248 DNIEEFD-YTEAD-EVMKYYPQFYHGVDKEGRPIYIELIGKVD 288
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 224 ECTPHRMDD-EFLIRFLRARNFIPQKAHRLLVNYYQFRAE 340
E P R DD ++RFLRAR F K+ ++ + Q+R E
Sbjct: 107 ELLPARHDDYHMMLRFLRARKFDIDKSKQMWSDMLQWRKE 146
>03_06_0559 +
34719296-34719410,34719519-34719577,34719664-34721322,
34722421-34722562,34722645-34723330
Length = 886
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 119 PPPEIQDYARQHCGEDPNTRLQAIYELRDMIYERGE--CTPHRMDDEFLIR 265
P P + + R+ G P+TR + E + E E C+ +DDE L+R
Sbjct: 36 PAPRVSENFRESDGGTPSTRPNSFLEDAPSLKESSEHSCSSSVVDDEALVR 86
>01_01_1135 -
9003823-9004182,9004308-9004367,9004441-9004683,
9005207-9005305,9005807-9005986,9006090-9006164
Length = 338
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 242 MDDEFLIRFLRARNFIPQKAHRLLVNYYQFR 334
+ D +RFLRARN+ QKA +++ + ++R
Sbjct: 45 LSDASCLRFLRARNWNVQKASKMMKSAVKWR 75
>11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600
Length = 447
Score = 27.1 bits (57), Expect = 9.3
Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Frame = +2
Query: 11 EGEQLSCAPALIFKQSRI*ASDMPTPDYSVDLDLGEPPPEIQDYARQHCGEDPNTRLQAI 190
E E +C A F + P+PD ++ L PPP + G ++
Sbjct: 84 EAEAETCLQAFKFASDAAQLHNEPSPDDNLPSRLRRPPPPPRWMPATDEGTASTVSAISV 143
Query: 191 YELR-----DMIYERGECTPHRMDDEFLIRFLRARNFIPQK 298
D + R PHR+DDE + A++ P +
Sbjct: 144 ASTEAGRALDAVARRVRQRPHRLDDERSSAWASAQHTYPAR 184
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 257 LIRFLRARNFIPQKAHRLLVNYYQFRAEN--PDLFEN-IHPMDLH 382
L+RFL+AR + KA +LV+ +R +N + E I P+DL+
Sbjct: 40 LVRFLKAREWHVSKACDMLVDSLNWRIQNEIDSILEKPIIPVDLY 84
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 33 RPRSYSNKVEFKRPTCRLRITAWTWTSASPRQRSKT 140
RPR +RPTC R W+ T +SP RS++
Sbjct: 183 RPRWSPGASTGRRPTCGAR--GWSCTCSSPAARSRS 216
>02_02_0223 -
8021040-8021247,8022275-8022367,8022808-8023059,
8023143-8023597,8023667-8023983,8024019-8024298,
8024423-8024728,8024762-8025130,8025216-8025455
Length = 839
Score = 27.1 bits (57), Expect = 9.3
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 68 ASDMPTPDYSVDLDLGEPPPEI-QDYARQHCGEDPNTRLQAIYELRDMIYERGECTPHRM 244
A ++P PD +++ + EP PEI +D + E P + +D E+ T R
Sbjct: 486 AMEIPVPDVPMEITVAEPEPEIFEDPSPAKDPEVPRVLRSHDSKSKDENKEKFMVTVFRG 545
Query: 245 DDEFLIRFLRARNFIPQKAHRLLVNYYQFRAENPDLFEN 361
E + R+ PQKA L Y + P+ +E+
Sbjct: 546 GKE----RAKLRDDDPQKAAELAGPTYFATDDCPEKYEH 580
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,402,772
Number of Sequences: 37544
Number of extensions: 334882
Number of successful extensions: 921
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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