Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0591
         (527 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14362| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.065)             60   1e-09
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)                    30   1.4  
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)          28   4.1  
SB_16220| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_38676| Best HMM Match : Arm (HMM E-Value=0.59)                      27   7.2  
SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05)               27   7.2  
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  

>SB_14362| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.065)
          Length = 215

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = +2

Query: 245 DDEFLIRFLRARNFIPQKAHRLLVNYYQFRAENPDLFENIHPMDLHAIGDADIMTVPPYR 424
           DDE L+R+LRAR      A  LL ++ +F   NP+L + ++  +L  I +     V PY 
Sbjct: 75  DDEMLLRYLRARGHNVVAAFALLCSHIEFHKNNPELLKGLNAFELRYILEDGFPCVLPYM 134

Query: 425 GPDGRRLIIYKFGNWDPKTICVEELFKATILSL 523
            P G  +++   G WD  T   + L +A +L+L
Sbjct: 135 DPVGSTIMVLFPGMWDTDTFSPDTLLQALMLTL 167


>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
          Length = 1188

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 23/88 (26%), Positives = 35/88 (39%)
 Frame = +2

Query: 80  PTPDYSVDLDLGEPPPEIQDYARQHCGEDPNTRLQAIYELRDMIYERGECTPHRMDDEFL 259
           PTP+++ D   G    EIQ    Q   +  N  L    E  D  + +GE    +  DE  
Sbjct: 460 PTPEHTED---GNTEQEIQ-MLEQKADDLLNKELNIERESNDSSFSKGEEAVKQTPDEMS 515

Query: 260 IRFLRARNFIPQKAHRLLVNYYQFRAEN 343
              L    +IP+K    +      R+E+
Sbjct: 516 ESILECFEYIPEKNTEFMTTVKMARSES 543


>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 372 WIFTPSGTQIS*RYHRTADPMGADSLYINLVIGTQRPFAWKNC 500
           W+F      IS R+     P  +DSL ++++    + F WKNC
Sbjct: 764 WMFCQKHQSISDRF-----PPTSDSLKLHIIRANYQTFIWKNC 801


>SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)
          Length = 666

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = -2

Query: 364 NVLEQIRILCSELIVVYEQSMSFLWYEISSTKESNQEFIIHPVRGTFTALINHVP*FVDG 185
           +VLE + I   E ++ +EQS+      + S  E + + ++ P+   F AL   V      
Sbjct: 578 SVLEFLEIEWDERVLHHEQSVGLPGGPVISRLERSSDQVVKPL--NFDALYRWVGAIPQH 635

Query: 184 LKSSIGVLAAMLTSVVLD 131
           +  + G LA MLT +  D
Sbjct: 636 VAETAGKLAPMLTVLGYD 653


>SB_16220| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 481

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = -2

Query: 370 RMNVLEQIRILCSELIVVYEQSMSFLW----YEISSTKESNQEFIIHPVRGTFTALIN 209
           R  VL  I I CS LI  +  S+  L+    Y+I S    NQ   +HP R T  A  N
Sbjct: 290 RYRVLSHIFIKCS-LIGSWVYSLLSLYCIFGYDIISDGRGNQRCSVHPDRRTLKASFN 346


>SB_38676| Best HMM Match : Arm (HMM E-Value=0.59)
          Length = 190

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 134 QDYARQHCGEDPNTRLQAIYELRDM 208
           QDY  +    DPNTRL A+  +++M
Sbjct: 55  QDYVDELLATDPNTRLCAVTNIKNM 79


>SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05)
          Length = 391

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 GECTPHRMDDEFLIRFLRARNFIPQKA 301
           G C     DD FL+++L+A NF  Q+A
Sbjct: 25  GSCLKLDQDDYFLLKWLQATNFDVQQA 51


>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1289

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 376  IHRMNVLEQIRILCSELI-VVYEQSMSFLWYEI 281
            ++R NV+   R+LC+ L+ VVY  S+   +YE+
Sbjct: 1213 VYRQNVVRS-RVLCATLLPVVYSVSLDSRYYEL 1244


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,283,273
Number of Sequences: 59808
Number of extensions: 367173
Number of successful extensions: 931
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)