Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0590
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WVI4 Cluster: Radical S-adenosyl methionine domain-co...    36   0.84 
UniRef50_UPI0000DB7563 Cluster: PREDICTED: similar to HECT, C2 a...    33   5.9  
UniRef50_Q98QS8 Cluster: OLIGOPEPTIDE ABC TRANSPORTER PERMEASE P...    32   7.8  
UniRef50_A7F3A5 Cluster: Predicted protein; n=1; Sclerotinia scl...    32   7.8  

>UniRef50_Q8WVI4 Cluster: Radical S-adenosyl methionine
           domain-containing protein 2; n=52; Eukaryota|Rep:
           Radical S-adenosyl methionine domain-containing protein
           2 - Homo sapiens (Human)
          Length = 361

 Score = 35.5 bits (78), Expect = 0.84
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +2

Query: 233 LSIFRFVLSIIFNVLVPRACWVRSPFW 313
           LS+FR  LS ++  LVP  CW+R+ FW
Sbjct: 14  LSVFRQPLSSLWRSLVPLFCWLRATFW 40


>UniRef50_UPI0000DB7563 Cluster: PREDICTED: similar to HECT, C2 and
           WW domain containing E3 ubiquitin protein ligase 2
           isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
           to HECT, C2 and WW domain containing E3 ubiquitin
           protein ligase 2 isoform 1 - Apis mellifera
          Length = 1204

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -3

Query: 382 LPPRVSHKMLFQFCHTPSFPSQIPKR 305
           LPPRV+HK+L +    P+ P ++PKR
Sbjct: 369 LPPRVTHKLLHRSNALPTGPPELPKR 394


>UniRef50_Q98QS8 Cluster: OLIGOPEPTIDE ABC TRANSPORTER PERMEASE
           PROTEIN; n=1; Mycoplasma pulmonis|Rep: OLIGOPEPTIDE ABC
           TRANSPORTER PERMEASE PROTEIN - Mycoplasma pulmonis
          Length = 352

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 185 KGNTTEIIFENIFLVFLSIFRFVL-SIIFNVLVPRACWVRSPFWNL*RKTRSMAELKKHL 361
           KG    I+F  +F   LS+   +L  IIF +L PR     S  WNL ++ +S    K  L
Sbjct: 282 KGEINVIMFNVVFFTGLSMLTQILVDIIFVILDPRIKIYSSSRWNLKKRIQSFITRKNIL 341

Query: 362 MTNSR 376
           +   R
Sbjct: 342 VQLQR 346


>UniRef50_A7F3A5 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 448

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 394 FFFKLPPRVSHKMLFQFCHTPSFPSQIPKRRTNPTR 287
           +F KLPP      +F F  TPSF S +P R+    R
Sbjct: 13  YFVKLPPPSPGNSIFTFPTTPSFSSTLPIRQNTSKR 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,567,143
Number of Sequences: 1657284
Number of extensions: 3927394
Number of successful extensions: 9880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9878
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)