Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0590
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    29   0.10 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.1  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 29.1 bits (62), Expect = 0.10
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 351 FSSAILRVFRHRFQKGERTQHARGTKTLKIILRTN 247
           F  AI  +F+ R Q+    +H  GT+  + +LR+N
Sbjct: 436 FRKAIFGMFQKRSQRQINLEHTSGTQVTEFVLRSN 470


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 194 TTEIIFENIFLVFLSIFRFVLSIIFNV 274
           T +IIF N F + LSI   V+ +IF V
Sbjct: 512 TNKIIFLNSFKMKLSIIFGVVHMIFGV 538



 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 224 LVFLSIFRFVLSIIFNVL 277
           ++FL+ F+  LSIIF V+
Sbjct: 515 IIFLNSFKMKLSIIFGVV 532


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,973
Number of Sequences: 2352
Number of extensions: 3984
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)