Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0587
         (584 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0215 + 26833213-26833599                                         30   1.6  
01_01_1102 - 8734984-8736090,8736430-8736557,8736671-8736708,873...    30   1.6  
07_01_0701 - 5284635-5284970,5285086-5285189,5285509-5285622,528...    27   8.3  
05_01_0080 - 535443-535481,535569-535698,536483-536586,536686-53...    27   8.3  
02_05_1318 - 35686493-35686640,35686756-35686826,35686916-356870...    27   8.3  
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453...    27   8.3  

>02_05_0215 + 26833213-26833599
          Length = 128

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 116 LNLVFSFALANSSSKYVLTPILQSITPGT 30
           LNLV  F +A++  KY  TP   S TP T
Sbjct: 11  LNLVLFFTVASACGKYCPTPSTPSTTPST 39


>01_01_1102 -
           8734984-8736090,8736430-8736557,8736671-8736708,
           8736815-8737030,8737252-8737413,8738381-8738559,
           8738693-8738799,8738918-8739082,8739201-8739284,
           8739364-8739559
          Length = 793

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
 Frame = +2

Query: 389 RLRSIRATLTESHFFRTHELIGSSL--LFVHDKRKAS--IWMID 508
           RLRS  +T+  S   R+H LI  SL  L   ++RKA+  +WMID
Sbjct: 280 RLRSTASTMANSTSSRSHCLIRISLTSLNATERRKATSKLWMID 323


>07_01_0701 -
           5284635-5284970,5285086-5285189,5285509-5285622,
           5285695-5286286
          Length = 381

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 532 WYRNSLCEIYHPNGSFPFVMNEQQRTPDQFVCSEEMR 422
           +Y+  LCE+   +G+   +  + Q  P    CS++MR
Sbjct: 63  FYQRQLCEVIAVDGNNQDMWRKMQGPPATICCSKQMR 99


>05_01_0080 -
           535443-535481,535569-535698,536483-536586,536686-536903,
           537755-537762,538146-538183,538475-538668,539168-539296,
           539392-539481,539726-539839,540008-540154,540228-540293,
           540876-540987
          Length = 462

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2

Query: 170 KSTEVKESRSQGYMIWRETISSTSTLGFRIDGV 268
           ++  VK  +   Y + +ETISST+ +  +++G+
Sbjct: 56  EALSVKAGKESKYQLTKETISSTAAINEKLEGM 88


>02_05_1318 -
           35686493-35686640,35686756-35686826,35686916-35687008,
           35687102-35687383,35687927-35688008,35688380-35688441,
           35688657-35688831,35688978-35689120,35689338-35689530,
           35689643-35689768,35689839-35690119
          Length = 551

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = -2

Query: 499 PNG-SFPFVMNEQ------QRTPDQFVCSEEMRFSQC 410
           P G  +PFV+ E+      +RTPD+FV  E +  SQC
Sbjct: 463 PRGVQYPFVVGERVLIMGNRRTPDKFVGKEAVITSQC 499


>01_04_0053 -
           15444421-15444747,15444905-15445116,15445198-15445377,
           15445572-15445836,15446308-15446522,15446611-15446784,
           15446872-15447010,15447523-15447786
          Length = 591

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +1

Query: 145 IDPKAPSEEEHRSKGVTKPRVHDLEGDYQLYLNFRLQDRRGEE 273
           +DP+    E+ R K      + D++ DY   ++++++D   EE
Sbjct: 528 LDPRKRKAEKKRRKANKFSVLTDMDADYDFKVDYQMKDALAEE 570


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,490,096
Number of Sequences: 37544
Number of extensions: 269921
Number of successful extensions: 724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)