Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0587
(584 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20800.1 68415.m02446 pyridine nucleotide-disulphide oxidored... 33 0.11
At4g23020.1 68417.m03320 expressed protein ; expression support... 31 0.57
At3g51290.1 68416.m05614 proline-rich family protein 31 0.75
At2g30940.2 68415.m03773 protein kinase family protein contains ... 31 0.75
At2g30940.1 68415.m03772 protein kinase family protein contains ... 31 0.75
At4g28220.1 68417.m04044 NADH dehydrogenase-related similar to 6... 29 3.0
At3g53440.2 68416.m05898 expressed protein 27 7.0
At3g53440.1 68416.m05897 expressed protein 27 7.0
At1g30470.1 68414.m03724 SIT4 phosphatase-associated family prot... 27 7.0
At1g22730.1 68414.m02840 MA3 domain-containing protein contains ... 27 7.0
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P... 27 9.2
At1g77160.1 68414.m08989 hypothetical protein contains Pfam prof... 27 9.2
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 27 9.2
>At2g20800.1 68415.m02446 pyridine nucleotide-disulphide
oxidoreductase family protein similar to GI:3718005
alternative NADH-dehydrogenase {Yarrowia lipolytica} ;
contains Pfam profile PF00070: Pyridine
nucleotide-disulphide oxidoreductase
Length = 582
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -1
Query: 152 GSIWIIFSYISFLNLV-FSFALANSSSKYVLTPILQSITPGTIE 24
GS W +S++S+LN + + + + ++ TP+L S+T GT+E
Sbjct: 70 GSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVE 113
>At4g23020.1 68417.m03320 expressed protein ; expression supported
by MPSS
Length = 439
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 344 DFTSSCPNAAVRYLERLRSIRATLTESHFFRTHELIGSSLLFVHDKRKASIWMIDFAKTV 523
D SSC + + RL + A + S F + I L F H KAS ++ K +
Sbjct: 29 DDLSSCSSNGFKSFPRL--LNAEIQRSGMFHHNRRITCGLAFSHAVHKASTALLTAVKLL 86
Query: 524 PVPENV 541
P P +V
Sbjct: 87 PFPSSV 92
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 30.7 bits (66), Expect = 0.75
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 341 KDFTSSCPNAAVRYLERLRSIRATLTESH--FFRTHELIGSSLLFVHDK 481
K+ S C A RYL+ L R TL+ SH + R+ +GSSL+ K
Sbjct: 11 KEIVSRC-KARKRYLKHLVKARQTLSVSHALYLRSLRAVGSSLVHFSSK 58
>At2g30940.2 68415.m03773 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 447
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -1
Query: 170 SSEGAFGSIWIIFSYISFLNLVFSFALANSSSKYVLTPILQSITPGTIEIAL 15
SS G+FGS + +F+++ N+ SFA N +K + + + I GT+ +A+
Sbjct: 143 SSTGSFGS-FNVFTFMEIKNVTDSFADDNVITKGDSSTVYRGILMGTVTVAV 193
>At2g30940.1 68415.m03772 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 445
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -1
Query: 170 SSEGAFGSIWIIFSYISFLNLVFSFALANSSSKYVLTPILQSITPGTIEIAL 15
SS G+FGS + +F+++ N+ SFA N +K + + + I GT+ +A+
Sbjct: 143 SSTGSFGS-FNVFTFMEIKNVTDSFADDNVITKGDSSTVYRGILMGTVTVAV 193
>At4g28220.1 68417.m04044 NADH dehydrogenase-related similar to 64
kDa mitochondrial NADH dehydrogenase [Neurospora crassa]
GI:4753821, alternative NADH-dehydrogenase [Yarrowia
lipolytica] GI:3718005; contains Pfam profile PF00070:
Pyridine nucleotide-disulphide oxidoreductase
Length = 571
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 152 GSIWIIFSYISFLNLV-FSFALANSSSKYVLTPILQSITPGTIEIALVPNS 3
G+ W S++ L++ + + + + + TP+L S+T GT+E + S
Sbjct: 56 GTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVES 106
>At3g53440.2 68416.m05898 expressed protein
Length = 512
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 185 KESRSQGYMIWRETISSTSTLGFRIDGVKKADGTSSKDFKTTKTRQQIAEAF 340
+ S S G +SS ST + VK DG SKD ++ R + + F
Sbjct: 141 QSSSSIGKKSGNSVLSSCSTKSISSEKVKGGDGLKSKDRSRSRVRPKTKKMF 192
>At3g53440.1 68416.m05897 expressed protein
Length = 512
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 185 KESRSQGYMIWRETISSTSTLGFRIDGVKKADGTSSKDFKTTKTRQQIAEAF 340
+ S S G +SS ST + VK DG SKD ++ R + + F
Sbjct: 141 QSSSSIGKKSGNSVLSSCSTKSISSEKVKGGDGLKSKDRSRSRVRPKTKKMF 192
>At1g30470.1 68414.m03724 SIT4 phosphatase-associated family protein
contains similarity to copper chaperone homolog CCH
GB:AAF15286 GI:6525011 from [Glycine max]; contains Pfam
profile PF04499: SIT4 phosphatase-associated protein
Length = 811
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 149 TQKHLQKKSTEVKESRSQGYMIWRETISSTS 241
T KH + +E + +S ++ WRET ST+
Sbjct: 647 TSKHPSENPSEPEPEKSPAWVEWRETSESTA 677
>At1g22730.1 68414.m02840 MA3 domain-containing protein contains
Pfam profile PF02847: MA3 domain; low similarity to
programmed cell death 4 protein [Gallus gallus]
GI:12958564
Length = 693
Score = 27.5 bits (58), Expect = 7.0
Identities = 25/117 (21%), Positives = 50/117 (42%)
Frame = +2
Query: 167 KKSTEVKESRSQGYMIWRETISSTSTLGFRIDGVKKADGTSSKDFKTTKTRQQIAEAFKD 346
KK ++ S+G + R+ S + V+K G + ++ + +I + K+
Sbjct: 207 KKQMKLLPDNSKGVEVLRKAEKSYLATPLHAEVVEKRWG-GTDNWTAEDVKARINDLLKE 265
Query: 347 FTSSCPNAAVRYLERLRSIRATLTESHFFRTHELIGSSLLFVHDKRKASIWMIDFAK 517
+ S E R I+ FF HE++ +L+ ++RKA + ++D K
Sbjct: 266 YVMSGDKK-----EAFRCIKGLKVP--FFH-HEIVKRALIMAMERRKAQVRLLDLLK 314
>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 938
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 366 FGQLLVKSLKASAICCLVFVVLKSLELVPSAFFTPSILKPKVEVELIVSLQIMYPWLRDS 187
+ L +K K +A + F + LVP++ P I+K E+ V + YPW R +
Sbjct: 111 YPSLKMKKKKGTAGKTIPFYTIVDGFLVPTSHH-PKIIKSHAEMVEDVDAFLAYPWGRYT 169
Query: 186 FTSVL 172
F ++
Sbjct: 170 FEMMI 174
>At1g77160.1 68414.m08989 hypothetical protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 258
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 DGVKKADGTS-SKDFKTTKTRQQIAEAFKDFTSSCPNAAVRYLERLRSI 403
DGV K DFKT + EA+KD T P V RLR +
Sbjct: 130 DGVSKLKRVIIDLDFKTQFELARQTEAYKDMTEMLPTVFVATEGRLRRV 178
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 151 PKAPSEEEHRSKGVTKPRVHDLEGDYQLYLNFRLQDRRGEES*WNKF*RLQNHEDE 318
P SEE KG + P +HD GD F +D E+ N R ++ +D+
Sbjct: 380 PDKSSEEAEYIKGNSDPEIHDSPGD--PVRKFIDEDAEEEDDSDNDLLRFEDEDDD 433
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,022,226
Number of Sequences: 28952
Number of extensions: 229690
Number of successful extensions: 719
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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