Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0584
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 31 0.53
12_01_0091 + 722420-722730,722864-722873 31 0.93
11_01_0090 + 679162-679472,679579-679588 31 0.93
08_02_0684 + 20031661-20031957,20032094-20032512,20033600-200336... 31 0.93
05_07_0345 - 29417029-29417769 31 0.93
02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606 31 0.93
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 30 1.6
05_07_0343 - 29404816-29405412 29 2.1
06_03_0700 + 23650275-23650299,23650381-23652350 29 2.8
02_02_0457 + 10503801-10507358 29 2.8
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 28 5.0
11_06_0514 - 24477720-24479915 27 8.7
07_01_0203 + 1469575-1470045 27 8.7
07_01_0199 - 1420982-1421452 27 8.7
07_01_0195 - 1387831-1388301 27 8.7
07_01_0191 - 1354678-1355148 27 8.7
07_01_0187 - 1321525-1321995 27 8.7
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427... 27 8.7
03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639 27 8.7
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 27 8.7
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 27 8.7
02_05_0311 + 27782110-27782326,27784121-27784268,27784394-277844... 27 8.7
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 438 DQR*AVAANSSSQIISIMLAAGGCLVICPRATVCLRRLC 322
DQR II ++L A CL ICP++ ++++C
Sbjct: 795 DQRIMAPTTEEKDIILLVLVAFACLQICPKSRPTMQQVC 833
>12_01_0091 + 722420-722730,722864-722873
Length = 106
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 170 VLCINFLIKMIPLVLFVLGAILATTEGCGPGKQLLKSGGLTAYEKQAIVDAHNRLRQTVA 349
V C + + P +++ G + A T GC G + L S T ++Q +QT A
Sbjct: 15 VTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLK--QQTSA 72
Query: 350 LG 355
+G
Sbjct: 73 MG 74
>11_01_0090 + 679162-679472,679579-679588
Length = 106
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 170 VLCINFLIKMIPLVLFVLGAILATTEGCGPGKQLLKSGGLTAYEKQAIVDAHNRLRQTVA 349
V C + + P +++ G + A T GC G + L S T ++Q +QT A
Sbjct: 15 VTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLK--QQTSA 72
Query: 350 LG 355
+G
Sbjct: 73 MG 74
>08_02_0684 +
20031661-20031957,20032094-20032512,20033600-20033606,
20033905-20033982,20034086-20034121
Length = 278
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -3
Query: 390 IMLAAGGCLVICPRATVCLRRLCASTMACFS*AVKPPDFNNCFPGPQPSVVARIAPKTNN 211
+ LA G C +I P A + LRRL +A F +V C PQ S + P N
Sbjct: 198 LWLAVGHCCLIIPYAVLRLRRLARKKVASFFVSVP------CMVHPQSSQIGFANPADN- 250
Query: 210 TKGIILIKKFIHNTLNL 160
+ K++H+ L L
Sbjct: 251 -----YVAKYVHHVLVL 262
>05_07_0345 - 29417029-29417769
Length = 246
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 254 GPGKQLLKSGGLTAYEKQAIVDAHNRLRQTVALGQITKQPPAANMMEMIWDDELAATAQR 433
GPG+ G Y +DAHN++R L QP + W ++LA A+R
Sbjct: 94 GPGQSFTGGRGTYKYMAHEFLDAHNKVRAQYGL-----QP-------LKWSNKLARYARR 141
Query: 434 WS 439
WS
Sbjct: 142 WS 143
>02_02_0456 + 10489544-10491064,10491506-10491632,10491633-10492606
Length = 873
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 266 QLLKSGGLTAYEKQAIVDAHNRLRQTVALGQITKQPPAANMMEMIWDDELAATAQRWSDQ 445
+L+K ++ K+A D N L+ + L I +++ +WDD L Q W
Sbjct: 271 RLIKEAIQSSSGKEATTDNLNCLQ--LGLSNIVNNKRFLIILDDVWDDALKENGQCWERL 328
Query: 446 CIP 454
C+P
Sbjct: 329 CLP 331
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 505 LSNRESAQITLGSAVVSGYTLIGPALSSSCQFIVPNHFHHVSCWGLFGNLSESNSLSETV 326
L+ +E +I +A G T AL + I N F+ GL GN+ ++ T+
Sbjct: 332 LAPQEKERIVDMAAAPGGKTTYIGALMKNTGIIYANEFNEKRLHGLLGNIHRM-GVTNTI 390
Query: 325 VCVHNG 308
VC ++G
Sbjct: 391 VCNYDG 396
>05_07_0343 - 29404816-29405412
Length = 198
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2
Query: 314 VDAHNRLRQTVALGQITKQPPAANMMEMIWDDELAATAQRWSD 442
VD HN+LR L QP M WD++LA A+RWSD
Sbjct: 60 VDGHNQLRARYGL-----QP-------MRWDNKLARQARRWSD 90
>06_03_0700 + 23650275-23650299,23650381-23652350
Length = 664
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 86 DVS*ITSENILYSSYE-SQLKRENQLKFRVLCINFLIKMIPLVLFVLGAILATTEGCGPG 262
D++ + N + S Y + L QLK RVL ++ +K+ + LG++ A+ EG
Sbjct: 582 DLAELDLSNCMVSDYGVAVLASARQLKLRVLSLSGCLKVTQKSVPFLGSMSASLEGLNLQ 641
Query: 263 KQLLKSGGLTAYEKQ 307
+ + + + EKQ
Sbjct: 642 FNFIGNHNIASLEKQ 656
>02_02_0457 + 10503801-10507358
Length = 1185
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +2
Query: 260 GKQLLKSGGLTAYEKQAIVDAHNRLRQTVALGQITKQPPAANMMEMIWDDELAATAQRWS 439
GK++ K + +K++ D + L+ AL + + +++ +WDD L + + W
Sbjct: 287 GKRITKEAIQSYSKKESTADHLDSLQH--ALSEKVRDKTLLIILDDMWDDALRESGRCWK 344
Query: 440 DQCIPAHDRAAQ 475
C P + AQ
Sbjct: 345 RFCAPFSNVLAQ 356
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 433 ALSSSCQFIVPNHFHHVSCWGLFGNLSESNSLSETVV 323
A S C FI+ N H++SC N+ S E VV
Sbjct: 457 ASSKFCAFIILNGMHNISCEVTIQNMESDLSRMEKVV 493
>11_06_0514 - 24477720-24479915
Length = 731
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 372 GCLVICPRATVCLRRLCASTMA 307
GC + C ++ CLR LC S+ A
Sbjct: 522 GCCISCSSSSKCLRCLCVSSSA 543
>07_01_0203 + 1469575-1470045
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 AANMMEMIWDDELAATAQRWSDQCIPAHDRAAQR-DLGRFPVGQNLA 514
A + + WDD LAA AQ +++Q A D A + D + G+NL+
Sbjct: 30 AVGVPALSWDDNLAAYAQGYANQ--RAGDCALRHSDRNNYQYGENLS 74
>07_01_0199 - 1420982-1421452
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 AANMMEMIWDDELAATAQRWSDQCIPAHDRAAQR-DLGRFPVGQNLA 514
A + + WDD LAA AQ +++Q A D A + D + G+NL+
Sbjct: 30 AVGVPALSWDDNLAAYAQGYANQ--RAGDCALRHSDRNNYQYGENLS 74
>07_01_0195 - 1387831-1388301
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 AANMMEMIWDDELAATAQRWSDQCIPAHDRAAQR-DLGRFPVGQNLA 514
A + + WDD LAA AQ +++Q A D A + D + G+NL+
Sbjct: 30 AVGVPALSWDDNLAAYAQGYANQ--RAGDCALRHSDRNNYQYGENLS 74
>07_01_0191 - 1354678-1355148
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 AANMMEMIWDDELAATAQRWSDQCIPAHDRAAQR-DLGRFPVGQNLA 514
A + + WDD LAA AQ +++Q A D A + D + G+NL+
Sbjct: 30 AVGVPALSWDDNLAAYAQGYANQ--RAGDCALRHSDRNNYQYGENLS 74
>07_01_0187 - 1321525-1321995
Length = 156
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 AANMMEMIWDDELAATAQRWSDQCIPAHDRAAQR-DLGRFPVGQNLA 514
A + + WDD LAA AQ +++Q A D A + D + G+NL+
Sbjct: 30 AVGVPALSWDDNLAAYAQGYANQ--RAGDCALRHSDRNNYQYGENLS 74
>03_06_0609 -
35042276-35042388,35042476-35042527,35042624-35042725,
35043546-35043745,35045258-35045336,35045541-35045595,
35045947-35046122,35046386-35046988,35047077-35047265,
35048150-35048201,35048289-35048356,35048873-35048911,
35048912-35048970,35049639-35049782,35050136-35050238,
35050368-35050467,35050596-35050612
Length = 716
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 414 WQLLLNAGPINVYPLTTALPNVIWADS 494
WQ L +GPI + P+ N++W S
Sbjct: 299 WQRFLPSGPIALLPIGDNYSNIVWTMS 325
>03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639
Length = 649
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 221 LGAILATTE---GCGPGKQLLKSGGLTAYEKQAIV 316
L I+A T GCGP +LL+ G+ A QA+V
Sbjct: 60 LSRIVADTSNVGGCGPSHRLLRDMGVAARSLQALV 94
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 547 WFSWWTSCP-SGCEVLSNRESAQITLGSAVVSGYTLIGPALS 425
W+SWW S G + S++ I L V+G IG AL+
Sbjct: 192 WYSWWESSGYFGADAASSKPPFVIVLPPPNVTGALHIGHALT 233
>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 485 GRFPVGQNLAATWTTRPPTEPSDSAPD 565
G FP G NL ++PP E APD
Sbjct: 1689 GTFPSGINLYTVTPSQPPVEGLQQAPD 1715
>02_05_0311 +
27782110-27782326,27784121-27784268,27784394-27784478,
27784555-27784650,27785666-27785731,27785900-27785998,
27786145-27786258,27786468-27786578,27786672-27786734,
27786816-27786908,27787960-27788073,27788440-27788505,
27788782-27788994,27789086-27789116,27789459-27791587
Length = 1214
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 82 LLLLFEFPRGSAALCAARSPASCRIPA 2
L LL E PR AA CA+ A CR+ A
Sbjct: 591 LRLLDEMPRRDAATCASLVSALCRLGA 617
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,412,294
Number of Sequences: 37544
Number of extensions: 374593
Number of successful extensions: 1172
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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