Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0584
         (602 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1) i...    35   0.048
At3g19690.1 68416.m02494 pathogenesis-related protein, putative ...    30   1.0  
At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger) fa...    27   7.2  
At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family...    27   7.2  
At2g39380.1 68415.m04833 exocyst subunit EXO70 family protein co...    27   9.6  

>At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1)
           identical to pathogenesis-related protein 1 {Arabidopsis
           thaliana} GI:166805; contains an extracellular proteins
           SCP/Tpx-1/Ag5/PR-1/Sc7 signature  (PDOC00772)
          Length = 176

 Score = 34.7 bits (76), Expect = 0.048
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +2

Query: 395 MIWDDELAATAQRWSDQCIPAHDRAAQRDLGRFPVGQNLAATWTT 529
           M+W++ LA  AQ ++ +   A D A +  LG  P G+NLAA W T
Sbjct: 61  MVWNETLATYAQSYAHE--RARDCAMKHSLG--PFGENLAAGWGT 101


>At3g19690.1 68416.m02494 pathogenesis-related protein, putative
           similar to PR-1a protein GI:19944 GB:X06930 from
           [Nicotiana tabacum]; contains Pfam profile PF00188:
           SCP-like extracellular protein
          Length = 161

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/78 (32%), Positives = 37/78 (47%)
 Frame = +2

Query: 281 GGLTAYEKQAIVDAHNRLRQTVALGQITKQPPAANMMEMIWDDELAATAQRWSDQCIPAH 460
           G L    +Q  ++AHN  R  V L  +            +WDDE+AA A  +++Q I  +
Sbjct: 19  GSLAEDLQQQFLEAHNEARNEVGLDPL------------VWDDEVAAYAASYANQRI--N 64

Query: 461 DRAAQRDLGRFPVGQNLA 514
           D A     G  P G+N+A
Sbjct: 65  DCALVHSNG--PFGENIA 80


>At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 Zinc
           finger, C3HC4 type (RING finger)
          Length = 496

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/57 (21%), Positives = 32/57 (56%)
 Frame = +3

Query: 426 LNAGPINVYPLTTALPNVIWADSLLDRTSQPLGQLVHQLNHPTLRLTSRSKSMLGSM 596
           ++A   ++ P++  LP+V++A +     ++P     +++ HP  + +S +  +L +M
Sbjct: 425 ISAAKSHIVPISAPLPHVVFAHAAQPPITEPREPHANEVAHPQPQSSSSAIEVLPAM 481


>At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family
           protein
          Length = 575

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 307 GHCGRTQPSQTDCCSRTNYQTAPSS*HDGNDLGR*IG 417
           G  G  QP+Q    + T YQT P   H    +G  IG
Sbjct: 519 GLMGMHQPTQPMAAASTTYQTLPPPPHTTTAMGEPIG 555


>At2g39380.1 68415.m04833 exocyst subunit EXO70 family protein
           contains Pfam domain PF03081: Exo70 exocyst complex
           subunit;
          Length = 637

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 23/71 (32%), Positives = 37/71 (52%)
 Frame = +2

Query: 107 ENILYSSYESQLKRENQLKFRVLCINFLIKMIPLVLFVLGAILATTEGCGPGKQLLKSGG 286
           E+++ SS + +   E++LK     I  + K   LV+  L  I  T   CG GK+ +KS  
Sbjct: 151 EDVMQSSDDEE---EDELKKAGETITKVEKAAALVMSDLKVIAETMISCGYGKECIKSYK 207

Query: 287 LTAYEKQAIVD 319
           L    +++IVD
Sbjct: 208 LI---RKSIVD 215


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,702,826
Number of Sequences: 28952
Number of extensions: 290329
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)