Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0583
(506 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 286 2e-78
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 285 2e-78
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 285 2e-78
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 166 2e-42
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 157 7e-40
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 99 2e-22
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 57 2e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 48 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 48 1e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 5e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 5e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 5e-04
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.019
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.025
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.099
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.23
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.30
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 0.53
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.1
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 2.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.7
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 4.9
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.5
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 25 6.5
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 8.6
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.6
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 286 bits (701), Expect = 2e-78
Identities = 132/147 (89%), Positives = 141/147 (95%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISK+GQTREHALLA+TLGVKQLI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLI 149
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 285 bits (700), Expect = 2e-78
Identities = 131/147 (89%), Positives = 141/147 (95%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISK+GQTREHALLA+TLGVKQLI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLI 149
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 285 bits (700), Expect = 2e-78
Identities = 131/147 (89%), Positives = 141/147 (95%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISK+GQTREHALLA+TLGVKQLI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLI 149
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 166 bits (403), Expect = 2e-42
Identities = 73/145 (50%), Positives = 103/145 (71%)
Frame = +3
Query: 72 RRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 251
+ H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 252 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 431
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 432 AGISKNGQTREHALLAFTLGVKQLI 506
AG + GQTREHA+LA T G+ L+
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLV 380
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 157 bits (382), Expect = 7e-40
Identities = 72/142 (50%), Positives = 96/142 (67%)
Frame = +3
Query: 81 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 260
+++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + ER
Sbjct: 178 VHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEER 237
Query: 261 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 440
RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G
Sbjct: 238 ARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGF 297
Query: 441 SKNGQTREHALLAFTLGVKQLI 506
+NGQTREHA L LG+ +++
Sbjct: 298 LENGQTREHAYLLRALGISEIV 319
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 99 bits (238), Expect = 2e-22
Identities = 60/149 (40%), Positives = 84/149 (56%)
Frame = +3
Query: 60 WARKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 239
+ RK+ H+NI IGHVD GK+T T I KC ++G+ SF +
Sbjct: 47 FVRKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQI 91
Query: 240 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 419
DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A
Sbjct: 92 DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATD 151
Query: 420 GEFEAGISKNGQTREHALLAFTLGVKQLI 506
G+ QTREH LLA +GVKQ++
Sbjct: 152 GQMP-------QTREHLLLARQVGVKQIV 173
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 56.8 bits (131), Expect = 2e-09
Identities = 37/113 (32%), Positives = 53/113 (46%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
RGITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 48.4 bits (110), Expect = 6e-07
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 264 RGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIKNMITGTSQA 386
+GITI A W+ FE S Y + IID PGH DF +
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVERALRVL 169
Query: 387 DCAVLIVAAGTGEFEAGISKNGQTREH 467
D AVL++ A +G I+ + Q R +
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 47.6 bits (108), Expect = 1e-06
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 264 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
RGIT+ ++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 41.9 bits (94), Expect = 5e-05
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 254
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79
Query: 255 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 407
E D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 41.9 bits (94), Expect = 5e-05
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 254
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79
Query: 255 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 407
E D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect(2) = 5e-04
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 207 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 380
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 381 QADCAVLIVAAGTG 422
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
Score = 22.6 bits (46), Expect(2) = 5e-04
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 42 SVTNQKWARKRRHINIVVIGHVDSGKST 125
S+ ++K + R + ++GHVD GK+T
Sbjct: 159 SLNSKKDSGPLRPPVVTLMGHVDHGKTT 186
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 33.5 bits (73), Expect = 0.019
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 254
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 255 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
I K Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 33.1 bits (72), Expect = 0.025
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +3
Query: 93 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 266
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 267 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 407
G K + + + IID PGH F GTS + A+L++
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.099
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 315 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 410
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.23
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 240 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 362
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.30
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 277 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 149
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.7 bits (61), Expect = 0.53
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
+ +V GH+ GKS L+Y + + + S +Y D ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187
Query: 264 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 407
R ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 301 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 170
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 33 SL*SVTNQKWARKRRHINIVVIGHVDSGKST 125
S+ S N+K R+ N++V+G SGKST
Sbjct: 17 SITSQINRKLIRRGFQFNVMVVGPSGSGKST 47
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 267 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 169
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 4.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 246 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 118
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 201 PGPPSRTSRWYVCQYHHIC 145
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 42 SVTNQKWARKRRHINIVVIGHVDSGKST 125
S+ Q+ R H+ I ++G + GKST
Sbjct: 33 SIVRQRLGRPGNHLKIGIVGMPNIGKST 60
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 33 SL*SVTNQKWARKRRHINIVVIGHVDSGKSTTTGHLI 143
SL + +++ R+ + N++V+G SGKST L+
Sbjct: 80 SLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLL 116
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 371 CDHVLDEISVSRSINDGNIVLASFEL 294
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,948,725
Number of Sequences: 5004
Number of extensions: 37104
Number of successful extensions: 140
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -