Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0583
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 295 1e-80
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 295 1e-80
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 295 2e-80
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 236 6e-63
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 169 8e-43
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 129 1e-30
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 84 6e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 84 6e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 1e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 1e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 1e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 1e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 5e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 48 5e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 47 7e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 1e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.003
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.052
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.052
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 34 0.068
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 32 0.21
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.63
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.5
AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical... 29 1.9
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 2.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.5
U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alph... 27 5.9
AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeri... 27 5.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 295 bits (724), Expect = 1e-80
Identities = 138/147 (93%), Positives = 144/147 (97%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISKNGQTREHALLA TLGVKQLI
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLI 149
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 295 bits (724), Expect = 1e-80
Identities = 138/147 (93%), Positives = 144/147 (97%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISKNGQTREHALLA TLGVKQLI
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLI 149
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 295 bits (723), Expect = 2e-80
Identities = 137/147 (93%), Positives = 144/147 (97%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 426 FEAGISKNGQTREHALLAFTLGVKQLI 506
FEAGISKNGQTREHALLA TLGVKQL+
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 236 bits (578), Expect = 6e-63
Identities = 108/115 (93%), Positives = 114/115 (99%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 410
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 188 bits (457), Expect = 3e-48
Identities = 86/142 (60%), Positives = 107/142 (75%)
Frame = +3
Query: 81 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 260
IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 171 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 230
Query: 261 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 440
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 231 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGF 290
Query: 441 SKNGQTREHALLAFTLGVKQLI 506
GQT+EHALL +LGV QLI
Sbjct: 291 ENGGQTKEHALLLRSLGVTQLI 312
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 188 bits (457), Expect = 3e-48
Identities = 86/142 (60%), Positives = 107/142 (75%)
Frame = +3
Query: 81 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 260
IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 189 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 248
Query: 261 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 440
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 249 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGF 308
Query: 441 SKNGQTREHALLAFTLGVKQLI 506
GQT+EHALL +LGV QLI
Sbjct: 309 ENGGQTKEHALLLRSLGVTQLI 330
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 169 bits (412), Expect = 8e-43
Identities = 74/145 (51%), Positives = 105/145 (72%)
Frame = +3
Query: 72 RRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 251
+ HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 252 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 431
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFE 226
Query: 432 AGISKNGQTREHALLAFTLGVKQLI 506
G + GQTREH++L T GVK L+
Sbjct: 227 TGFDRGGQTREHSMLVKTAGVKHLV 251
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 129 bits (311), Expect = 1e-30
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
+++ HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 246 LKAER 260
LK +
Sbjct: 63 LKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 83.8 bits (198), Expect = 6e-17
Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 18 SDITRSL*SVTNQKWARKRRHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 191
+ ITR+ + A + ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 192 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 371
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 372 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 503
GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 83.8 bits (198), Expect = 6e-17
Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 18 SDITRSL*SVTNQKWARKRRHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 191
+ ITR+ + A + ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 192 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 371
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 372 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 503
GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 83.0 bits (196), Expect = 1e-16
Identities = 54/143 (37%), Positives = 73/143 (51%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
R + H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 426 FEAGISKNGQTREHALLAFTLGV 494
QTREH LLA +GV
Sbjct: 150 MP-------QTREHLLLARQVGV 165
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 83.0 bits (196), Expect = 1e-16
Identities = 54/143 (37%), Positives = 73/143 (51%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
R + H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 426 FEAGISKNGQTREHALLAFTLGV 494
QTREH LLA +GV
Sbjct: 151 MP-------QTREHLLLARQVGV 166
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 83.0 bits (196), Expect = 1e-16
Identities = 54/143 (37%), Positives = 73/143 (51%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 245
R + H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 246 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 425
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 426 FEAGISKNGQTREHALLAFTLGV 494
QTREH LLA +GV
Sbjct: 151 MP-------QTREHLLLARQVGV 166
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 1e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.4 bits (125), Expect = 5e-08
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 47.6 bits (108), Expect = 5e-06
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 218
RKR N+ VI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 219 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 386
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 387 DCAVLIVAAGTG 422
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 47.2 bits (107), Expect = 7e-06
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 218
RKR N+ VI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 219 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 386
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 387 DCAVLIVAAGTG 422
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect(2) = 1e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 207 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 383
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 384 ADCAVLIVAAGTG 422
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 24.2 bits (50), Expect(2) = 1e-04
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 69 KRRHINIVVIGHVDSGKST 125
+RR + ++GHVD GK+T
Sbjct: 153 ERRPPIVTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 33 SL*SVTNQKWARK-RRHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 206
SL + Q A K HI N+ ++ HVD GK++ L+ I R
Sbjct: 3 SLETALKQAAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA---------- 52
Query: 207 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 386
G +Y +D + E+ RGIT+ + + +ID+PGH DF + + +
Sbjct: 53 --GKLRY---MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILS 107
Query: 387 DCAVLIV 407
D A+L++
Sbjct: 108 DIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 33 SL*SVTNQKWARK-RRHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 206
SL + Q A K HI N+ ++ HVD GK++ L+ I R
Sbjct: 3 SLETALKQAAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA---------- 52
Query: 207 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 386
G +Y +D + E+ RGIT+ + + +ID+PGH DF + + +
Sbjct: 53 --GKLRY---MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILS 107
Query: 387 DCAVLIV 407
D A+L++
Sbjct: 108 DIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.052
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.052
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 84 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 264 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 422
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.068
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +3
Query: 81 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 260
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 261 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 437
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 438 ISKNGQTREHALLA 479
I QT EH LLA
Sbjct: 109 IQP--QTAEHLLLA 120
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 32.3 bits (70), Expect = 0.21
Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Frame = +3
Query: 6 SARGSDITRSL*SVTNQKWARKRRHINI--VVIGHVDSGKSTTTGHLIYKC--GGIDKRT 173
+ +GS+ R++ V +K ++ I + V+G D GKST G L C G K
Sbjct: 142 TVKGSNSRRTVVEVLVRKVPESQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKAR 201
Query: 174 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPG 341
I F + E+ G K + V + + RG ++ A E S VT+ID G
Sbjct: 202 IGIF-RFPHEVRTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAG 258
Query: 342 HRDFIKNMITGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 506
+ K I G + A L+VAA + GI+ TREH L L + +
Sbjct: 259 DAKYQKTTIHGLTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFV 308
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.63
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 315 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 410
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 324 IIDAPGHRDFIKNMITGTSQADCAVLIV 407
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 162 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 162 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 263
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical
protein Y71G12B.13 protein.
Length = 508
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +3
Query: 12 RGSDITRSL*SVTNQKWARKRRHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 191
R DI L S+T + W RR + + +S L+ K GID + I+K
Sbjct: 259 RIEDIENCLQSITREDWKTARRRMINFTVEEKMVARSGNADELL-KSVGIDLQQIKKAVG 317
Query: 192 EAQEMGKGSFKYAWVLDKLKAERERGIT 275
E +F A + + K E +R I+
Sbjct: 318 EKVGNVMRNFSLASLAKRRKIEEDRKIS 345
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 81 INIVVIGHVDSGKSTTT 131
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 66 RKRRHINIVVIGHVDSGKSTTTGHL-IYKCGG 158
RK++ + +++IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 503 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 345
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 344 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 225
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 318 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 413
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alpha
subunit protein 12 protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 72 RRHINIVVIGHVDSGKSTTTG--HLIYKCGGIDKRTIEKFEKE 194
RR IN++++G +SGKST H+I+ G + + ++
Sbjct: 27 RRQINLLLLGSGESGKSTFVKQMHIIHGAGEFTADEVRAYRQQ 69
>AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 72 RRHINIVVIGHVDSGKSTTTG--HLIYKCGGIDKRTIEKFEKE 194
RR IN++++G +SGKST H+I+ G + + ++
Sbjct: 27 RRQINLLLLGSGESGKSTFVKQMHIIHGAGEFTADEVRAYRQQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,057,037
Number of Sequences: 27780
Number of extensions: 218638
Number of successful extensions: 652
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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