Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0582
(579 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3 va... 36 0.10
AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM ... 36 0.10
AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associa... 36 0.10
BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3 pr... 34 0.32
AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein. 34 0.32
AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein. 34 0.32
AF276809-1|AAQ14318.1| 398|Homo sapiens Z-band alternatively sp... 32 1.3
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL365502-2|CAI14576.1| 145|Homo sapiens nasal embryonic LHRH fa... 31 2.9
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein. 31 2.9
AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.9
BC008284-1|AAH08284.1| 346|Homo sapiens chromosome 16 open read... 31 3.9
AY358834-1|AAQ89193.1| 228|Homo sapiens DAKV6410 protein. 31 3.9
AL831828-1|CAD38541.1| 206|Homo sapiens hypothetical protein pr... 30 5.1
BC130474-1|AAI30475.1| 723|Homo sapiens tripartite motif-contai... 29 9.0
BC130472-1|AAI30473.1| 723|Homo sapiens tripartite motif-contai... 29 9.0
AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens ... 29 9.0
AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protei... 29 9.0
AF406650-1|AAK95655.1| 392|Homo sapiens putative gap junction p... 29 9.0
AF007157-1|AAC19158.1| 397|Homo sapiens unknown protein. 29 9.0
AB209783-1|BAD93020.1| 523|Homo sapiens Fas-activated serine/th... 29 9.0
>AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3
variant protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.10
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 317 KVLHKQFNSPINLYSEQNIANSIRQQTS 400
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM
protein protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.10
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 317 KVLHKQFNSPINLYSEQNIANSIRQQTS 400
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associated
LIM protein protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.10
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 317 KVLHKQFNSPINLYSEQNIANSIRQQTS 400
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3
protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 206 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 364
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 365 QNIANSIRQQ 394
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein.
Length = 617
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 206 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 364
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 365 QNIANSIRQQ 394
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 206 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 364
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 365 QNIANSIRQQ 394
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>AF276809-1|AAQ14318.1| 398|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-6 protein.
Length = 398
Score = 32.3 bits (70), Expect = 1.3
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Frame = +2
Query: 71 PNGYQDPKHPEEEVVSNWPYR-TTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDY 247
P G +D P+ S+ P + P+ L A+ RE + P DY
Sbjct: 174 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGADY 233
Query: 248 RDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSEQNIANSIRQQ 394
++ + +S L + +G +A ++H Q+N+PI++YS+ I ++I Q
Sbjct: 234 QERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQDAIMDAIAGQ 288
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 246 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 303
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 304 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 343
>AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 164 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 221
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 222 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 261
>AL365502-2|CAI14576.1| 145|Homo sapiens nasal embryonic LHRH
factor protein.
Length = 145
Score = 31.1 bits (67), Expect = 2.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 92 KHPEEEVVSNWPYRTTPLVLPGAKVRREPG--PTESYLRHHPNPA 220
K P+ E + R P ++P V PG PT++ LR HP PA
Sbjct: 87 KVPKAEYIPTIIRRDDPSIIPILYVSPAPGLPPTDALLRPHPGPA 131
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 246 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 303
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 304 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 343
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 246 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 303
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 304 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 343
>AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 111 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 168
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 169 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 208
>AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 164 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 221
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 222 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 261
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 246 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 303
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 304 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 343
>AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 111 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 168
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 169 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 208
>AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 2.9
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 137 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAP 316
+P +PG+++ +P ++S HP A+ P R T ++A+ Q+ +P
Sbjct: 164 SPASIPGSQMPPQPPGSQSESSSHP--ALSQSPMPQERGTQRNPQMAQYGPQQTGPSMSP 221
Query: 317 KVLHK-QFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 433
Q ++ I+ + + N + + Q S G+Y RP
Sbjct: 222 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 261
>BC008284-1|AAH08284.1| 346|Homo sapiens chromosome 16 open reading
frame 48 protein.
Length = 346
Score = 30.7 bits (66), Expect = 3.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 125 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNH 241
P+ ++P P +EPG ++RH+ A RAP H
Sbjct: 178 PHVSSPQPTPPGPEAKEPGLGVDFIRHNARAAKRAPRRH 216
>AY358834-1|AAQ89193.1| 228|Homo sapiens DAKV6410 protein.
Length = 228
Score = 30.7 bits (66), Expect = 3.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 125 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNH 241
P+ ++P P +EPG ++RH+ A RAP H
Sbjct: 60 PHVSSPQPTPPGPEAKEPGLGVDFIRHNARAAKRAPRRH 98
>AL831828-1|CAD38541.1| 206|Homo sapiens hypothetical protein
protein.
Length = 206
Score = 30.3 bits (65), Expect = 5.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 122 WPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAP 232
WP + L P + + +PGP+ L P AM+AP
Sbjct: 21 WPTQEPSLCPPSQQTQLQPGPSSHQLLTAPPSAMKAP 57
>BC130474-1|AAI30475.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 285 CCSEWLAKRHLR-CCTSNSTLQSIYTRNR----TLQTLSGSKLRLCQLTAITDGRTLSRG 449
CC W + + CCT++S L Y +R T+ T +LR ++ T RT S
Sbjct: 66 CCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSD 125
Query: 450 KSFTRNATMQQSTHIL 497
++ ++H++
Sbjct: 126 TQVDEVKSIPANSHLV 141
>BC130472-1|AAI30473.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 285 CCSEWLAKRHLR-CCTSNSTLQSIYTRNR----TLQTLSGSKLRLCQLTAITDGRTLSRG 449
CC W + + CCT++S L Y +R T+ T +LR ++ T RT S
Sbjct: 66 CCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSD 125
Query: 450 KSFTRNATMQQSTHIL 497
++ ++H++
Sbjct: 126 TQVDEVKSIPANSHLV 141
>AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ40097 fis, clone TESTI2004169. ).
Length = 708
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 285 CCSEWLAKRHLR-CCTSNSTLQSIYTRNR----TLQTLSGSKLRLCQLTAITDGRTLSRG 449
CC W + + CCT++S L Y +R T+ T +LR ++ T RT S
Sbjct: 66 CCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSD 125
Query: 450 KSFTRNATMQQSTHIL 497
++ ++H++
Sbjct: 126 TQVDEVKSIPANSHLV 141
>AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protein
42 protein.
Length = 723
Score = 29.5 bits (63), Expect = 9.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 285 CCSEWLAKRHLR-CCTSNSTLQSIYTRNR----TLQTLSGSKLRLCQLTAITDGRTLSRG 449
CC W + + CCT++S L Y +R T+ T +LR ++ T RT S
Sbjct: 66 CCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALRTGSSD 125
Query: 450 KSFTRNATMQQSTHIL 497
++ ++H++
Sbjct: 126 TQVDEVKSIPANSHLV 141
>AF406650-1|AAK95655.1| 392|Homo sapiens putative gap junction
protein pannexin 3 protein.
Length = 392
Score = 29.5 bits (63), Expect = 9.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 133 HHSSRAPGS*GPKGAWPHRELPAS 204
HH PG K WPH+ LP S
Sbjct: 90 HHKQDGPGQDKMKSLWPHKALPYS 113
>AF007157-1|AAC19158.1| 397|Homo sapiens unknown protein.
Length = 397
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +1
Query: 154 GS*GPKGAWPHRELPASSPQPSNEGTS*PRLP*YPYETKGGRVGAAASGWRRGT*GVAQA 333
G GP AWP + ++P +N P P ET G G + W RG GVA A
Sbjct: 8 GGAGPASAWPAPQSARAAPAAAN----CPERLLRPRETSGPAPGGSLPRWPRGG-GVAMA 62
>AB209783-1|BAD93020.1| 523|Homo sapiens Fas-activated
serine/threonine kinase isoform 1 variant protein.
Length = 523
Score = 29.5 bits (63), Expect = 9.0
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = -3
Query: 487 VDCCIVAFLVKDLPLDNVRPSVMAVSWQRRSLLPDRVCNVLFRV*IDWRVELLVQHLRCL 308
+ C+ ++ P D P V A+ +RR LP + L + + R E L H+ L
Sbjct: 159 IHVCLHLAVLLGFPSDG--PLVCALEQERRLRLPPKPPPPLQPLLREARPEELTPHVMVL 216
Query: 307 FANHSLQHRL 278
A H +HRL
Sbjct: 217 LAQHLARHRL 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,648,146
Number of Sequences: 237096
Number of extensions: 2214472
Number of successful extensions: 6375
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6370
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -