Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0581
         (563 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97074-1|CAA65782.1|  142|Homo sapiens clathrin-associated prote...    30   6.5  
BC006337-1|AAH06337.1|  142|Homo sapiens adaptor-related protein...    30   6.5  
AJ010149-1|CAA09019.1|  104|Homo sapiens clathrin-associated pro...    30   6.5  
AJ010148-1|CAA09018.1|  142|Homo sapiens clathrin-associated pro...    30   6.5  

>X97074-1|CAA65782.1|  142|Homo sapiens clathrin-associated protein
           protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 76  FNFSEVYTSIDVLFLAGDPR 17
           FNF +VYT +D +FLAG+ R
Sbjct: 105 FNFYKVYTVVDEMFLAGEIR 124


>BC006337-1|AAH06337.1|  142|Homo sapiens adaptor-related protein
           complex 2, sigma 1 subunit protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 76  FNFSEVYTSIDVLFLAGDPR 17
           FNF +VYT +D +FLAG+ R
Sbjct: 105 FNFYKVYTVVDEMFLAGEIR 124


>AJ010149-1|CAA09019.1|  104|Homo sapiens clathrin-associated
           protein AP17 delta protein.
          Length = 104

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 76  FNFSEVYTSIDVLFLAGDPR 17
           FNF +VYT +D +FLAG+ R
Sbjct: 67  FNFYKVYTVVDEMFLAGEIR 86


>AJ010148-1|CAA09018.1|  142|Homo sapiens clathrin-associated
           protein AP17 protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 76  FNFSEVYTSIDVLFLAGDPR 17
           FNF +VYT +D +FLAG+ R
Sbjct: 105 FNFYKVYTVVDEMFLAGEIR 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,167,333
Number of Sequences: 237096
Number of extensions: 1268771
Number of successful extensions: 2431
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2425
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)