Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0578
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    25   0.68 
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    25   0.90 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   3.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   6.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   6.4  

>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +1

Query: 4   ICHNILVCPEAREPFLNYFAAILQRNE----RRAQLQTDERTL 120
           +CH +  CP  R+ F N    +L  +E    R+ Q +T + T+
Sbjct: 35  VCHPVQQCPSVRDEFFN-SDRVLSEDEIDYLRKLQCKTKDVTI 76


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   ICHNILVCPEAREPFLNYFAAILQRNERRAQLQTDERTLAGDGFM-LNVCSVLQLLSVRI 180
           I  N ++C ++ +PF     AI+ +N+R   +  ++ ++  +G++     S+++LL  ++
Sbjct: 326 IQQNAILCWDSNKPFAPQNMAIVYKNDRDI-VYPNDLSIDQNGYVWFMTNSIIKLLYTQL 384

Query: 181 KLE 189
            L+
Sbjct: 385 NLD 387


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 56  ISRPYCSEMNDAHNCRLMNVRSLAMASC*TCVRCYNCC-PSALSWSACTR 202
           +SR   S +N ++ C          A+C   VRC +C  P  +  + C +
Sbjct: 415 VSRDCHSPVNHSNVCIRCGTSGHLAATCEAEVRCASCAGPHRMGSAQCVQ 464


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 104  LMNVRSLAMASC*TCVRCYNCCPSAL 181
            ++  R++A  +   CV+C  C P  +
Sbjct: 1379 IVGARNVAKRTVFNCVKCTRCRPKLI 1404


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 245 SSRTFAHESGWKVYSGYTRSSLMRTDSNCNTEHTFNM 135
           +SRT A    W+V S Y  S       +  T+   N+
Sbjct: 179 ASRTVARSFKWEVLSSYMNSDHRAIRIDLETQSVRNL 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,005
Number of Sequences: 2352
Number of extensions: 6750
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)