Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0577
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.14 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
 Frame = -3

Query: 451 CPN*ECSGENEEFT--NCT-NPCPPR-TCNSLVARFDCSKPKP-----CEEGC-ACKPDY 302
           CP     G+N E    +C  NPC    TC+ LV  F CS P       CE     C+P  
Sbjct: 210 CPK-GFQGQNCELNVDDCKPNPCQNGGTCHDLVNSFSCSCPSGTLGYICEINVDDCRPG- 267

Query: 301 LKLDDNSACV-KI----CECPQMASSPDC 230
               +N  C+ K+    C+CP     P C
Sbjct: 268 -ACHNNGTCLDKVGGFECKCPPGFVGPRC 295



 Score = 24.2 bits (50), Expect = 0.75
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -3

Query: 526 SCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPP 386
           +C A   C E ++    G C   E+C N EC  +  +      PC P
Sbjct: 527 NCTASTRCWEVFM---DGIC--NEDCNNPECLFDGRDCEESLQPCNP 568


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = -3

Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNC 404
           CV K+   +      V RE C    C+ E    T C
Sbjct: 120 CVTKDEPFRPHPHNLVGREGCKKGVCTMEINSDTMC 155


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 474 VNVSPEKIAQIRNVQAKMKSLPTARTHVRRVLAI 373
           +   PEKI+ IRN       +P    HVR  L +
Sbjct: 513 IKADPEKISAIRNF-----PVPQKTKHVRAFLGL 541


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 245 SHLRTFANLNTGRIVVEFQVVWFASASLFAG 337
           +HL   A+L+ G I V   ++W  + + +AG
Sbjct: 64  THL-ALADLSVGLINVLTDIIWKTTVAWYAG 93


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 81  INIFVYLWMSCTIF*STF 134
           +N  +++W+SC+ F   F
Sbjct: 405 VNAGMWMWLSCSSFFQQF 422


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 474 PLSSFRYPSLHT 509
           PLSS  YPS+ T
Sbjct: 21  PLSSVSYPSMFT 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,689
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)