Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0577
(543 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 39 0.002
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 38 0.005
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_45766| Best HMM Match : F5_F8_type_C (HMM E-Value=3.1e-27) 36 0.021
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.037
SB_57949| Best HMM Match : PAN (HMM E-Value=0.13) 35 0.037
SB_27190| Best HMM Match : PAN (HMM E-Value=0.13) 35 0.037
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 35 0.049
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.086
SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3) 33 0.11
SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.20
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 33 0.20
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.26
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 32 0.35
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.35
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 31 0.46
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 31 0.46
SB_8177| Best HMM Match : TSP_1 (HMM E-Value=6e-38) 31 0.46
SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08) 31 0.61
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 31 0.61
SB_18624| Best HMM Match : EGF (HMM E-Value=7.8e-06) 31 0.80
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 30 1.1
SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.1
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 30 1.4
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.9
SB_52240| Best HMM Match : DUF1700 (HMM E-Value=4.1) 29 1.9
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 1.9
SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_44830| Best HMM Match : I-set (HMM E-Value=1.1e-08) 29 2.5
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 29 2.5
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 29 2.5
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 2.5
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_52147| Best HMM Match : EGF (HMM E-Value=0) 29 3.2
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_33986| Best HMM Match : EGF_CA (HMM E-Value=3.5e-17) 29 3.2
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.3
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 4.3
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09) 28 4.3
SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.3
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.7
SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 28 5.7
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 27 7.5
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 7.5
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 27 7.5
SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08) 27 9.9
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.9
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = -3
Query: 538 VDQKSCKAG-CVCKEGYL--KDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSL 368
V Q CK G C+ +E +DD G + C N C + T+ C+
Sbjct: 2459 VTQFRCKTGTCITREWRCDHQDDCGDGSDEQQCVNYTCPNHTFKCTSGHCIANSSVCDGD 2518
Query: 367 VARFDCSKPKPCEEG----------CACKPDYLKLDDNSACVKICECPQMA 245
D S K C+ G C+C+P YL + D +C + EC A
Sbjct: 2519 TDCADGSDEKDCDLGTSTCGAGLFRCSCRPGYLLMSDGRSCQDVDECKSYA 2569
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDSGKCVAREN-CPN*-ECSGENEEFTNC-TNPCPPRTCNSLV 365
D+ C + + ++ +C+A+ C +C ++E C + C + N
Sbjct: 1118 DEVDCGLESCGNDRWRCSNTSRCIAKSQVCDGRVDCPDASDEGPGCGLDQC--HSNNGGC 1175
Query: 364 ARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMAS 242
A+ P+ + C+C+P + DN C I EC +S
Sbjct: 1176 AQLCMDVPEGVQ--CSCRPGFTLASDNKTCEDINECLNSSS 1214
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 508 VCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCE 329
+C+ + + D+ KC+ + N C G T+ ++ P R+C + VA C K +
Sbjct: 3286 ICRNSHFRCDNNKCIPKWNV----CDGV-YHCTDKSDEAPYRSCPARVA---CRKDQFKC 3337
Query: 328 EGCACKPDYLKLDDNSACVKI---CECP 254
C P D N C I +CP
Sbjct: 3338 LNRRCVPVRAVCDSNDDCGDISDELQCP 3365
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 29/120 (24%)
Frame = -3
Query: 529 KSCKAGCVC-KEGYLKDDSGKCVARENCP-------------------N*ECSGENEEFT 410
+ C GC C KEG L ++ KCV + CP N C G + T
Sbjct: 1154 RRCVEGCYCEKEGELMNNEHKCVDKTQCPCYYGDTMYKYGEIRKDRCNNCTCKGGVFDCT 1213
Query: 409 N--CTNPCPPRTCNSLVARFDCSK-------PKPCEEGCACKPDYLKLDDNSACVKICEC 257
N C C R C +PC GC C PD L + DN CV+ +C
Sbjct: 1214 NVDCEAMCLTRGLVYSDCGITCENLHPINGGERPCVSGCYC-PDGLIMHDNGTCVQSMQC 1272
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 388 PRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECP 254
P TC+ L D + C EGC C+ + +++ CV +CP
Sbjct: 1138 PSTCDDLANVTDTCPSRRCVEGCYCEKEGELMNNEHKCVDKTQCP 1182
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -3
Query: 532 QKSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEF-------TNCTNPC 392
++ C +GC C +G + D+G CV C +C N+ + T+C+ C
Sbjct: 1245 ERPCVSGCYCPDGLIMHDNGTCVQSMQC---QCKHNNKYYDAGAISPTDCSRKC 1295
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKCVARENC 449
C GC C EG ++ D GKCV C
Sbjct: 787 CVDGCFCPEGKIQ-DRGKCVDPGQC 810
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 427 ENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDD---NSACVKICEC 257
EN F CT+ CP TC+ R + C EGC CK ++++ + C+K EC
Sbjct: 182 ENAVFKYCTSACP-ETCHDPPGRNKTCSMR-CVEGCECKEEFVQRVNAVGKVQCIKRKEC 239
Query: 256 P 254
P
Sbjct: 240 P 240
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 36.7 bits (81), Expect = 0.012
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTN--PCPPRTCNSLVA 362
+++ CK CK GY+KD G C +C G +F C C R ++
Sbjct: 994 EKEKCKP-MQCKSGYVKDVCGCCDVCAKTVTQKCGGYWGQFGTCAEGLSCVLRKRGQVLK 1052
Query: 361 RFDCS-KPKPCE-EGCACKP----DYLKLDDNSACVKICECPQMASSPDCP 227
S KP CE CA K + + +N A ICECP+M P
Sbjct: 1053 NVQFSFKPGHCEPANCAEKSCGLYETCTMINNEA---ICECPRMCKDKGEP 1100
>SB_45766| Best HMM Match : F5_F8_type_C (HMM E-Value=3.1e-27)
Length = 255
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 337 PCEEGCACKPDYLKLDDNSACVKIC 263
PC+EG CKPD+ K DD +C+K C
Sbjct: 81 PCQEGYNCKPDFNK-DDTYSCIKGC 104
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 35.1 bits (77), Expect = 0.037
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDC 350
+ C G C+ YL +SG CVA C E TN + CP
Sbjct: 1247 RPCTPGYYCESDYLSTESGLCVAGYYCNGSTVFPRPENQTN-GDRCP----KGHFCPTGS 1301
Query: 349 SKPKPCEEGCACKPDYLKLDDN-SACVKICECP 254
S P+PC G +Y + +N C+ CP
Sbjct: 1302 SGPQPCWPGTYADTEYNQFRNNCKPCIPGMYCP 1334
Score = 27.9 bits (59), Expect = 5.7
Identities = 28/95 (29%), Positives = 35/95 (36%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSK 344
C AG C G C CPN G EF PCP T N+ + S
Sbjct: 577 CCAGFYCPSNSSSCSLG-CPTGHYCPN----GTKTEFQY---PCPRGTFNNQTGQQAFSA 628
Query: 343 PKPCEEGCACKPDYLKLDDNSACVKICECPQMASS 239
+PC G C + L + + C K C + A S
Sbjct: 629 CEPCLPGKYCGSEGL-TNPSGDCAKGFYCVRGAWS 662
Score = 27.5 bits (58), Expect = 7.5
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 11/112 (9%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSGKCVARENC---------PN*ECSGEN--EEFTNCTNPCPPR 383
K C G C L SG C C P+ +C + E + PCPP
Sbjct: 1325 KPCIPGMYCPTYRLSYPSGNCSEGYYCPAGETKQSPPDKQCQPGHYCPEGSGLHRPCPPG 1384
Query: 382 TCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDCP 227
+ + C K C G C P+ ++ N +C + + DCP
Sbjct: 1385 SYQPFSEKGICLK---CPPGMYCDPNEARV--NFSCSSVNVSHGTITPSDCP 1431
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 11/81 (13%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFT-----NCT------NPCPPRTC 377
C AG C+ L +G C CPN + S + CT PC +
Sbjct: 763 CLAGQYCESEGLDTPTGPCDKGYYCPNGQSSKRPSAYVCTPGHYCTEGSPVKRPCASGSY 822
Query: 376 NSLVARFDCSKPKPCEEGCAC 314
R+DC K C EG C
Sbjct: 823 QDEYQRWDC---KTCPEGYYC 840
>SB_57949| Best HMM Match : PAN (HMM E-Value=0.13)
Length = 230
Score = 35.1 bits (77), Expect = 0.037
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 337 PCEEGCACKPDYLKLDDNSACVKI 266
PC+EG CKPD+ K DD +C+K+
Sbjct: 140 PCQEGYNCKPDFNK-DDTYSCIKV 162
>SB_27190| Best HMM Match : PAN (HMM E-Value=0.13)
Length = 709
Score = 35.1 bits (77), Expect = 0.037
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 337 PCEEGCACKPDYLKLDDNSACVKI 266
PC+EG CKPD+ K DD +C+K+
Sbjct: 100 PCQEGYNCKPDFNK-DDTYSCIKV 122
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 34.7 bits (76), Expect = 0.049
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = -3
Query: 511 CVCKEGYL----KDDSGKCVARENCPN*ECSGENEEFT-NCTNPCPPRTCNSLVARFDCS 347
C+C +G+ + D +C+ C E F +C +TC + D
Sbjct: 537 CLCLQGFTGQRCETDIDECLTTPCLNGGTCHDEINNFRCDCPTGYYGKTCTTTTDECD-- 594
Query: 346 KPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
P PC+ G +CK L LD N C CP + DC
Sbjct: 595 -PNPCKNGASCKD--LHLDYN------CSCPVGFTGKDC 624
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 33.9 bits (74), Expect = 0.086
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTN--CTNPCPPRTCNSLVARFDCSKPK 338
C C EGY +D GKC C +G+++ N CTN C L R K
Sbjct: 484 CQCAEGYERDSQGKCADVNECK----TGKHDCSVNALCTNTDGTFICRCL--RGYIGDGK 537
Query: 337 PCEEGCACKPDYLKLDDNSACV 272
C + CK D N+ C+
Sbjct: 538 TCIDFDECKLPKNDCDVNAECI 559
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 421 EEFTNCTNPCPPRT-CNSLVARFDCSKPKPCE-EGCACKPDYLKLDDNSACVKICECPQM 248
+E TN T+ C C +++ F C K E G C P L+ + N AC EC
Sbjct: 297 DECTNKTDDCDANALCTNVLGSFVCRCLKGFEGNGKTCIPK-LQTECNPACGNNSECKMQ 355
Query: 247 ASSPDC 230
A+ +C
Sbjct: 356 AAGAEC 361
>SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3)
Length = 227
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -3
Query: 472 KCVARENCPN*ECSGENEE--FTNCTNPCPPRTCNSLVARFDCSKPKPCEEGC-ACK 311
KC+ + N EC+G N + +T CT C CN+L CS + C + C CK
Sbjct: 31 KCIQQCNGTKCECTGRNRDAIYTGCTQLCGRHPCNTLT----CS-TENCIQSCHGCK 82
>SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 454 NCPN*ECS-GENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSA 278
NC + +C G + NCTNP P ++ + + +PC+ C+ Y + SA
Sbjct: 186 NCSS-KCGIGTHNRTRNCTNPAPAFGGSNCSG--NTMETEPCDNLCSVNGGYTAWSNWSA 242
Query: 277 CVKICECPQMASSPDC 230
C C A + +C
Sbjct: 243 CPVTCGAGSQARTRNC 258
>SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 454 NCPN*ECS-GENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSA 278
NC + +C G + NCTNP P ++ + + +PC+ C+ Y + SA
Sbjct: 209 NCSS-KCGIGTHNRTRNCTNPAPAFGGSNCSG--NTMETEPCDNLCSVNGGYTAWSNWSA 265
Query: 277 CVKICECPQMASSPDC 230
C C A + +C
Sbjct: 266 CPVTCGAGSQARTRNC 281
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 32.7 bits (71), Expect = 0.20
Identities = 27/94 (28%), Positives = 36/94 (38%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C+C +GY + D KCV + C + + N C CN+ A F C C
Sbjct: 689 CLCPQGY-RSDWNKCVDIDECADPQ-----------VNKCQ-HICNNTQASFHCE----C 731
Query: 331 EEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
EG Y+ D C I EC Q +C
Sbjct: 732 REG------YILNSDGITCSDIDECKQRMCEKEC 759
Score = 28.3 bits (60), Expect = 4.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICEC 257
C C+ Y+ +DN C+ + EC
Sbjct: 292 CQCRQGYVLANDNKTCINLNEC 313
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 32.7 bits (71), Expect = 0.20
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Frame = -3
Query: 511 CVCKEGY----LKDDSGKCVARENCPN*ECSGE-NEEFTN-CTNPCPPRTCNSLVARFDC 350
CVC EGY + D G+C ++ N C + E+F C N C+ + DC
Sbjct: 1049 CVCPEGYSGRTCQLDFGQCYSKPCKNNATCVDQVGEQFVCLCRNGWEGFYCDKNID--DC 1106
Query: 349 SKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
+ PC G C + ++C C + S PDC
Sbjct: 1107 AN-NPCYNGATCV--------DGVGFRLCACAKGFSGPDC 1137
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 32.3 bits (70), Expect = 0.26
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -3
Query: 469 CVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLD 290
CV C + C+ N+E T C TC V+ C +P PC+ CKP + D
Sbjct: 4254 CVTSGQCQSSPCAN-NKEKTACYEDWDSYTC---VSAAPC-QPDPCKNNATCKP---QKD 4305
Query: 289 DNSACV 272
+ CV
Sbjct: 4306 ETFLCV 4311
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = -3
Query: 460 RENCPN*ECS--GENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGC--ACKPDYLKL 293
R CP CS N +C N CPP+ C S +++ + K C+E C C P
Sbjct: 1679 RPECPLICCSVCPPNCSAQSCGNFCPPKCCTSQLSK---DRQKECKESCPKVCGPGCPVQ 1735
Query: 292 DDNSACVKICECPQMASSPDC 230
+ + C A P C
Sbjct: 1736 CCSDLNICPANCTGSACKPGC 1756
Score = 29.5 bits (63), Expect = 1.9
Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKC------VARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVA 362
C C C KD +C V CP CS N NCT C ++
Sbjct: 1703 CPPKC-CTSQLSKDRQKECKESCPKVCGPGCPVQCCSDLNICPANCTGSACKPGCITIED 1761
Query: 361 RFDCS--KPKPCEEGCACKPDYLKLDDNSACVKICE---CPQMASS---PDCPKL*CK 212
S K C E C K L ++ C+K CP+ + PDCP + CK
Sbjct: 1762 SVTVSLGNDKLCPEACLTK--CLPSCPSTCCIKNSPPVVCPKSCETTCTPDCPVMCCK 1817
Score = 29.1 bits (62), Expect = 2.5
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 10/98 (10%)
Frame = -3
Query: 457 ENCPN*ECSG--ENEEFTNCTNPCPPRTCNSLVARF--DCSKPKPCEEGC--ACKPDYLK 296
E CP C E ++C CPPR C +++ + S + C C CKP+
Sbjct: 1184 EGCPEQCCQNGCPVECLSSCKPHCPPRCCFTVLIPIADNQSVKEKCPAVCKETCKPEC-- 1241
Query: 295 LDDNSACVKICE-CPQMA---SSPDCPKL*CKVKLKII 194
S C+K CP P CP C LK I
Sbjct: 1242 --PLSCCLKDARGCPATCVEDCKPGCPPECCFAVLKPI 1277
Score = 27.5 bits (58), Expect = 7.5
Identities = 34/129 (26%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Frame = -3
Query: 541 SVDQKSCKAGCV--CKEGYLKDDSGKCVARE---NCPN*EC----SGENEEFTNCTNPCP 389
+V +SCK C C L C CP C +G++ +C + C
Sbjct: 1348 AVCSESCKPDCPIKCCSNALSSCPQSCSGDHCGAECPTQCCLLADNGQHSSTASCPSACS 1407
Query: 388 PRTCN-SLVARFDCSKPKPCEE----GCACKPDYLKLDDNSACVKIC--ECPQ--MASS- 239
P CN AR + +P E C + + VK C ECP + S+
Sbjct: 1408 PSGCNPDCPARCCITVLQPLNEKHNTTAECPSECSETCKPECPVKCCTGECPAGCLPSNC 1467
Query: 238 -PDCPKL*C 215
PDCP C
Sbjct: 1468 KPDCPSKCC 1476
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 32.3 bits (70), Expect = 0.26
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDC 350
+ CK G C A +CPN C G TNCT C + C +V C
Sbjct: 181 QECKTGS-CSFNCAAQTCESSCAHGSCPNMTCGG-----TNCTQKC-GKDCQQVV----C 229
Query: 349 SKPKPCEEGCACKPDYLKLDDNS-ACVKICECPQMASSPDCPKL*CKV 209
S C++ C + L + + C + C Q A DC C V
Sbjct: 230 SASGKCDQSCDGEGCNLYCSEGAKTCNQKC---QGACVTDCKSRWCGV 274
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 433 SGENEEFTNCTNPCPP---RTCNSLVARFDCSKPKPCEE-GCACKPDYLKLDDNSACVKI 266
+G NCTNP P RTC+ L R + +PC C Y + + S C K
Sbjct: 401 NGTRTRIRNCTNPPPKHNGRTCDVLGPRIE---TQPCNTFYCPVDGGYTQWSEYSQCSKT 457
Query: 265 CECPQMASSPDC 230
C + + +C
Sbjct: 458 CGLGEAFRTRNC 469
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTN--CTNPCPPRTCNSLVARFDCSKPK 338
C C EGY ++ GKC C +G+++ N CTN C L R K
Sbjct: 27 CQCAEGYERNSQGKCADVNECK----TGKHDCSVNALCTNTDGTFICRCL--RGYIGDGK 80
Query: 337 PCEEGCACKPDYLKLDDNSACV 272
C + CK D N+ C+
Sbjct: 81 TCIDFDECKLPKNDCDVNAECI 102
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 31.5 bits (68), Expect = 0.46
Identities = 24/89 (26%), Positives = 32/89 (35%)
Frame = -3
Query: 505 CKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEE 326
C EGY + + CP+ N T NPCP T N L AR + C
Sbjct: 1042 CMEGYYCPGANSEYSSRPCPSGYYC-PNGTATPYQNPCPAGTFNPLQARTGFKDCEGCSA 1100
Query: 325 GCACKPDYLKLDDNSACVKICECPQMASS 239
G C + N C C + ++S
Sbjct: 1101 GMYCAVQGMS-QPNGTCAAGYYCRRNSTS 1128
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDC 350
KSC+ G C G + ++ C + CP G E T+ PCP T N L + +
Sbjct: 1468 KSCEPGYYCLLGTVNFNNTVCPSGHYCP-----GGTE--TSTQYPCPAGTYNRLAGQTND 1520
Query: 349 SKPKPCEEGCACK 311
S C G C+
Sbjct: 1521 SSCVNCTAGKYCE 1533
Score = 30.3 bits (65), Expect = 1.1
Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 9/108 (8%)
Frame = -3
Query: 523 CKAGCVCKEGY---LKDDSGK---CVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVA 362
C G C++G D GK C A CP T+ PCP T ++
Sbjct: 2333 CGPGYFCRQGANMTTPDLPGKAEICPAGSYCPEGHYCMMG---THHPEPCPSGTFSNGTQ 2389
Query: 361 RFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECP--QMASSP-DCP 227
D SK PC EG C L + C CP Q S+P CP
Sbjct: 2390 LIDSSKCIPCREGWYCDSTGL-VQPKDECDPGFFCPEGQNKSNPYPCP 2436
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = -3
Query: 526 SCKAGCVCKEGYLKDDSGKCVARENCPN*E-CSGENEEFTNCTNPCPPRTCNSLVARFDC 350
+C AG C G + V CP C +++ T PCPP T ++
Sbjct: 467 NCSAGFYCISGAKVPNPTDGVTGNVCPAGSYCPSKSQMHT----PCPPGTFSNSTQNTAL 522
Query: 349 SKPKPCEEGCACK 311
S C EG C+
Sbjct: 523 SDCNDCTEGYYCE 535
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/87 (24%), Positives = 33/87 (37%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSK 344
C+AG C EG +++ C +CP +G CP T + C
Sbjct: 1794 CRAGFYCPEGSQDENAVPCTIGLHCP----TGSKTPI-----DCPEGTFTNTTTSPSC-- 1842
Query: 343 PKPCEEGCACKPDYLKLDDNSACVKIC 263
+ C EG C P+ + D ++ C
Sbjct: 1843 -QDCPEGFYCVPENVTSGDPTSGYHTC 1868
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCT 401
D +C AG C L +G C R CP + EF NCT
Sbjct: 818 DCYNCTAGYYCDAEGLTRVAGPCAERYYCPGANTRPDPPEF-NCT 861
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 31.5 bits (68), Expect = 0.46
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Frame = -3
Query: 511 CVCKEGY--LKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARF------ 356
C CK+G + + GKC +CP G +F N CPP C A
Sbjct: 3189 CECKDGETGVLAEDGKC----DCPPKCDDGRKPKFVNNRWKCPPPECGEHPACVTGRKGE 3244
Query: 355 DCSKP--KPCEEGCACKPDYLKLDD-NSACV 272
CS+P PC+ C+ + L D S CV
Sbjct: 3245 GCSQPDVTPCDSSCSGNGIPVVLGDCGSRCV 3275
>SB_8177| Best HMM Match : TSP_1 (HMM E-Value=6e-38)
Length = 950
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 427 ENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICE 260
E +++ C NPC N C+ P P +G CK DYL+ C+ C+
Sbjct: 80 EWSQWSLCDNPCGGSVVNRTRT---CTNPTPTPDGKPCKGDYLQ--TKLECIAPCK 130
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 415 FTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKIC 263
+T+CT C T +R DC+ P+P G C DY++ S +K+C
Sbjct: 240 WTSCTKTCG--TGMQKRSR-DCTNPRPIHGGQNCTGDYVQ--TKSCKLKVC 285
>SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08)
Length = 574
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 388 ADMGSCSW*TLHFRLNIPNLGNFLGRHIYRYRLLDIPLYTRIRL 519
A++ C W FR P GN LG H+Y Y D P TRI L
Sbjct: 71 AELTICVW----FRTR-PQAGNVLGGHLYFYHTGDHPDQTRIAL 109
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 403 TNPC-PPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
+NPC TCN LV ++C+ P P G C+ D + N CV C + + +C
Sbjct: 282 SNPCLNGGTCNDLVNGYNCNCP-PGYNGTTCEIDINECASN-PCVNGGTCADLVNGFNC 338
>SB_18624| Best HMM Match : EGF (HMM E-Value=7.8e-06)
Length = 382
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -3
Query: 397 PCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDCPK 224
P N V R C KPC G C D+ +C CP AS C K
Sbjct: 109 PSASYLANPSVCRNGCCLSKPCLNGGTCTEKC----DHPKTKFVCNCPANASGKQCEK 162
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -3
Query: 508 VCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCE 329
VC++ + ++ A + C +C+G E + T + + +C +
Sbjct: 477 VCRDDFFREPGKSLSAVDVCSPCQCTGPGVETGKTSCARDDSTPGVIAGQCECKQYTQGR 536
Query: 328 EGCACKPDY--LKLDDNSACVKICEC 257
+ ACKP + LK ++ CV C C
Sbjct: 537 QCDACKPGFYDLKSSHSTGCV-TCGC 561
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Frame = -3
Query: 511 CVCKEGYLKDDSG---------KCVARENCPN*ECSGEN--EEFTNC-TNPCP-PRTCNS 371
C CKEGY D G C+ C + +G N E C ++PC TC
Sbjct: 1436 CTCKEGYTGKDCGTDIDECSSNPCLNEGTCTDQGYTGPNCEVEVNECQSDPCQNGGTCED 1495
Query: 370 LVARFDCSKPKPCEEGCACKPDYLKLDD--NSACVKICECPQMASSPDC 230
L+A + C C+ G + +D+ +S C C + + C
Sbjct: 1496 LIASYRCF----CKAGYTGRHCETDIDECASSPCANGGTCTDLVDAHKC 1540
>SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 868
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C CK GY D KC + + ++ + C P C+ + CS
Sbjct: 322 CTCKPGYKGDPKVKCEGDGDGDGDDDDDDDGDINECNY---PNDCSQM-----CSNTAGS 373
Query: 331 EEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
+ C+C ++ +D C I EC ++ DC
Sbjct: 374 YK-CSCVNGFVLSNDLKTCADINECATPVTN-DC 405
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C C+ GY+ ++G+ C+ T+ NP C+ ++ DC C
Sbjct: 268 CKCRPGYISSNNGRI----------CT----VVTSSMNPLDINECDPILGSNDCGANTDC 313
Query: 331 EEG-----CACKPDYLKLDDNSAC 275
G C CKP Y K D C
Sbjct: 314 TNGPGNYSCTCKPGY-KGDPKVKC 336
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICECPQMASSPDCP 227
C C P Y + D C + EC A CP
Sbjct: 538 CGCPPGYKLMSDEKTCQDVDECENAAQL--CP 567
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 352 CSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDCPKL*CKVKL 203
C C+ G C DY K+D C+C DC +L C+V L
Sbjct: 163 CKDVTRCKNGGTCVNDYNKIDGY-----YCDCAPDFGGLDCGELKCRVSL 207
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*E--CSGEN 422
C CK GY +DS CV C CSG N
Sbjct: 811 CSCKRGYAHNDSNVCVDVNECTETPYVCSGNN 842
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/92 (25%), Positives = 35/92 (38%)
Frame = -3
Query: 505 CKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPCEE 326
C++GY G V +NC ECS + C + C + V +CS
Sbjct: 1211 CRDGYY----GDAVVAKNCAKCECSACGAVTSVCNHTNGACQCKANVIGPNCS------- 1259
Query: 325 GCACKPDYLKLDDNSACVKICECPQMASSPDC 230
CKP+ + C + CEC + + C
Sbjct: 1260 --TCKPNTWNFNSCLGC-EDCECAEASLGQSC 1288
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 18/97 (18%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKC------VARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDC 350
C CK G D G+C + E C +C+ + C + +C + V DC
Sbjct: 82 CRCKPGVEGRDCGRCKPGFYNMTSEGCRPCDCNVNGSSSSLCDHVTGQCSCKANVVGRDC 141
Query: 349 SK---------PKPCEEGCACK---PDYLKLDDNSAC 275
S+ P C E CAC L+ DD+ C
Sbjct: 142 SRCKVSSYGFGPAGCTE-CACNVHGSASLQCDDSGVC 177
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKC--VARENCPN*ECS 431
CVCK GY + SG+C V + C N +C+
Sbjct: 218 CVCKPGYEQALSGQCVPVCTQGCVNGKCT 246
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDSGKCVARE-NCP-N*ECSGENEEFTNCTN-PCPPR--TC-- 377
D+ CK C + D G+C+ C +C+ ++E C N C P TC
Sbjct: 373 DESGCKPTTTCSANEFRCDDGRCITSTFRCDREFDCTDRSDE-RGCVNKTCAPYEFTCAF 431
Query: 376 --NSLVARFDCSKPKPCEEG 323
+ RF C C +G
Sbjct: 432 SGRCIPGRFRCDHRSDCLDG 451
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C C+ GY+ ++G+ C+ T+ NP C+ ++ DC C
Sbjct: 442 CKCRPGYISSNNGRI----------CT----VVTSSMNPLDINECDPILGSNDCGANTDC 487
Query: 331 EEG-----CACKPDYLKLDDNSAC 275
G C CKP Y K D C
Sbjct: 488 TNGPGNYSCTCKPGY-KGDPKVKC 510
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICECPQMASSPDCP 227
C C P Y + D C + EC A CP
Sbjct: 763 CGCPPGYKLMSDEKTCQDVDECENAAQL--CP 792
>SB_52240| Best HMM Match : DUF1700 (HMM E-Value=4.1)
Length = 254
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 337 PCEEGCACKPDYLKLDDNSACVK 269
PC EG +C+PD L DD +C +
Sbjct: 83 PCSEGYSCRPD-LNKDDTYSCTR 104
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 526 SCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCP 389
+C + C C G +G CV C ++ NC +PCP
Sbjct: 502 NCSSKCDCINGSCDPVTGACVCNRRVTGQRC---DKPCINCNSPCP 544
Score = 29.1 bits (62), Expect = 2.5
Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 18/118 (15%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSGKCVARENCPN*ECSGENEEFT---NCTNPCP--PRTCNSLV 365
+ C++ C C GY +G C C T NCT PC +CN+
Sbjct: 582 RQCQSKCQCLHGYCDHVTGSCECLPGWTGKRCDQACPSGTYGFNCTLPCACVNGSCNATD 641
Query: 364 ARFDCSK-------PKPC---EEGCACKPDYLKLDDNSACVKI---CECPQMASSPDC 230
+C+ +PC + G C L +N C I C C + P C
Sbjct: 642 GSCNCAAGYHGNACDRPCPAGKHGANCGLKCL-CANNGTCNAITGRCSCGTGWTGPSC 698
>SB_34310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -3
Query: 493 YLKDDSGKCVARENCPN*ECS-GENEEFTNCT--NPCPPRTCNSLVARFDCSKPKPCEEG 323
++ D KC E C +CS G + T C NPC R C P +
Sbjct: 214 HIVDVQTKCDT-EQC---KCSEGFQGKGTACLPINPCHEANQGGCEGRAICVYTGPGKSI 269
Query: 322 CACKPDYLKLDDNSACVKIC 263
C C P Y KLD++ A +C
Sbjct: 270 CKCPPGY-KLDESQARCTLC 288
>SB_44830| Best HMM Match : I-set (HMM E-Value=1.1e-08)
Length = 480
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +3
Query: 204 NLTLHYNFGQSGELAICGHSQILTQAELSSSFK*SGLQAHPSSQGLGLLQSKRATSELQV 383
NLT H G + CG Q+ T ELS F + P S L + T E QV
Sbjct: 30 NLTWHLFVGLAVYHRRCGMRQVQTLPELSRIFLAPTNERRPFSSALVSQMQRLMTQEYQV 89
Query: 384 R 386
R
Sbjct: 90 R 90
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = -3
Query: 526 SCKAGCVCKEGYLKDDSGKCVARENCPN*E--CSGENEEFTNCTNPCPPR-TC---NSLV 365
S + C C+ K GKCV N E C+ ++E+ +C N C R C +
Sbjct: 67 SDERNCACRSAEFKCPDGKCVHPSKFCNGESDCTDGSDEW-SCDNSCSSRHACADGTCVT 125
Query: 364 ARFDCSKPKPCEEG 323
C+ C++G
Sbjct: 126 WSLTCNGVSDCQDG 139
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -3
Query: 481 DSGKCVARENCPN*ECSGENEEFTNC--TNPCPPRTCNSLVARFDCSKPKPCEEGCACKP 308
+ G CV +EN C N E +C NPC P C + + + C G +
Sbjct: 324 NGGTCVPQENGYRCTCQA-NYEGNDCERANPCSPNPCRNGGTCSEMNNAAVCACGVQFEG 382
Query: 307 DYLKLDDNSACVKICEC 257
+ ++D + C C
Sbjct: 383 NQCEIDKCAKCDMHATC 399
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/81 (28%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = -3
Query: 541 SVDQKSCKAGCVCKEGYLKDDS--GKCVAREN-CPN*ECSGENEEFTNCTNPCPPRTCNS 371
SV+ CVCK+GY D K V N C N + +C C
Sbjct: 252 SVNADCILGHCVCKDGYHGDGKTCNKNVCHPNPCHNGATCVATDSSFDC--DCVAGWTGP 309
Query: 370 LVARFDCSKPKPCEEGCACKP 308
L P PC+ G C P
Sbjct: 310 LCQTRQYCIPNPCQNGGTCVP 330
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = -3
Query: 526 SCKAGCVCKEGYLKDDSGKCVARENCPN*E--CSGENEEFTNCTNPCPPR-TC---NSLV 365
S + C C+ K GKCV N E C+ ++E+ +C N C R C +
Sbjct: 67 SDERNCACRSAEFKCPDGKCVHPSKFCNGESDCTDGSDEW-SCDNSCSSRHACADGTCVT 125
Query: 364 ARFDCSKPKPCEEG 323
C+ C++G
Sbjct: 126 WSLTCNGVSDCQDG 139
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Frame = -3
Query: 400 NPCPPRTCNSLVARFDCSKP-----KPCEEGCACKPDYL-----KLDDNSACVKICECPQ 251
NPC TC LV + C P + C + YL N++ CECP+
Sbjct: 488 NPCHNGTCEDLVNNYKCVCPDNRQERTCAGNSSVCDTYLCRNGGSCFSNNSTYYTCECPK 547
Query: 250 MASSPDC 230
+ DC
Sbjct: 548 GYTGHDC 554
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C C GY+ + + +NC N CSG NC + CN D S K C
Sbjct: 2643 CECFVGYIGKECENVSSVDNCGNQTCSGRG----NCISQVSSYLCNCTT---DYS-GKDC 2694
Query: 331 EEGCACKPDYLKLDDNSACV 272
+ C D + L D S+ +
Sbjct: 2695 LQLCRQYFDIIFLVDGSSSI 2714
>SB_52147| Best HMM Match : EGF (HMM E-Value=0)
Length = 364
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = -3
Query: 511 CVCKEGYLKDDS----GKCVARENCPN*ECSGENEEF-TNCTNPCPPRTCNSLVARFDCS 347
CVC EGY D C++ C N C + +C N C +L+ D
Sbjct: 82 CVCSEGYTGDRCETVVDMCISAP-CHNGTCINYGSSYICDCFNSYTGHLCETLI---DAC 137
Query: 346 KPKPCEEG 323
PC +G
Sbjct: 138 HSNPCNDG 145
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 28.7 bits (61), Expect = 3.2
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDSGK--CVARE-NCPN-*ECSGENEEFTNCTNPCPP---RTC 377
D+K+C CK Y+ S K C+ + C +C+ +++E +C PC R
Sbjct: 1297 DEKNCGEPSTCKPNYISCASMKAICIPKMWRCDGMLDCTDKSDE-EDCP-PCKENQFRCD 1354
Query: 376 NSLVARFD--CSKPKPC-----EEGCA-CKPDYLKLDDNSACVKICECPQMASSPD 233
N D C K K C E GCA C+P++ + + +C Q+ D
Sbjct: 1355 NGQCIDGDPRCDKYKNCTDGSDELGCATCEPNFFRCNTGKCISARWQCDQLDDCGD 1410
>SB_33986| Best HMM Match : EGF_CA (HMM E-Value=3.5e-17)
Length = 85
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICECPQMASSPDCP 227
C C+P + LDD C + EC S CP
Sbjct: 24 CICRPGFYLLDDERTCEDLDEC--SLPSTKCP 53
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 28.3 bits (60), Expect = 4.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICEC 257
C+C P ++ DN C+ I EC
Sbjct: 732 CSCNPGFVLASDNFGCLDINEC 753
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 379 CNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDCPKL 221
C + V +C+ P C+C P Y + N +C+ + EC S+ +C ++
Sbjct: 835 CATKVCSHNCTNT-PGSYRCSCFPGYQQGPKNDSCLDVDEC--STSTHNCTQI 884
Score = 27.9 bits (59), Expect = 5.7
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Frame = -3
Query: 511 CVCKEGY-LKDDSGKCVARENCP------N*ECSGENEEFTNCTNPCPPRTC-------- 377
C C GY L D CV + C N C+ FT C+ C R C
Sbjct: 535 CSCWTGYILGSDYKSCVDVDECSSGIAQCNQTCANIPGSFT-CS--CDQRNCLDIDECSS 591
Query: 376 NSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICEC 257
N + C+ P C C P + + ++ +CV I EC
Sbjct: 592 NLHICNQTCNNV-PGSYYCTCFPGFYLMMEDQSCVDIDEC 630
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKP--- 341
C C +DD+ P + NE T+ C S+V RF CS
Sbjct: 315 CSCSNQTSEDDTASSGGSMASPGFNLTTSNETETSSGESVDG--CYSVVQRF-CSHQCLN 371
Query: 340 KPCEEGCACKPDYLKLDDNSACVKICEC 257
P C C +D +CV + EC
Sbjct: 372 TPGSFICTCPEGLALSEDGKSCVDVDEC 399
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 322 CACKPDYLKLDDNSACVKICECPQMASSPDC 230
C C Y LDD +C I EC S +C
Sbjct: 814 CGCHQGYNLLDDLISCGDIDECATKVCSHNC 844
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 385 RTCN-SLVARF-DCSKPKPCEEGCACKPDYLKLDDNSACVKICE 260
+TC ++V R +C+ P+P G C+P K + C K CE
Sbjct: 226 KTCGGAVVTRTRECNSPEPSNGGKPCEPSDAK-ETKEDCTKPCE 268
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 355 DCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDCPKL*CKVK-LKIIWISKT 179
+CS PC G C D A ++C+CP+ P C + + IW+ K
Sbjct: 2822 NCSNENPCLNGGTCH------DTVPAGWRVCQCPRGYRGPHCEQTTRTFRGTSYIWLPKL 2875
Query: 178 LFY 170
Y
Sbjct: 2876 TAY 2878
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -3
Query: 406 CTNPCPPRTCNS-LVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQ-MASSPD 233
C P R C+S + + C EG CK + + ++C K CP+ + +
Sbjct: 835 CQVCLPGRYCDSDTTTETNMNTTMRCPEGLYCKGGLTNVSEATSCSKAHYCPEGIEAEVP 894
Query: 232 CP 227
CP
Sbjct: 895 CP 896
>SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09)
Length = 133
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 523 CKAGCVCKEGYLKDDSGKCVARENC 449
C GC C EG ++ D GKCV C
Sbjct: 88 CVDGCFCPEGKIQ-DRGKCVDPGQC 111
>SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1408
Score = 28.3 bits (60), Expect = 4.3
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Frame = -3
Query: 535 DQKSCKAGCV---CKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLV 365
++K+C AG C+ + S C + C G N C R C++ +
Sbjct: 421 NRKACDAGFTGDYCEINIDECASAPCHSYSTC----LDGVNNYTCLCGPRWTGRDCSTNL 476
Query: 364 ARFDCSKPKPCEEGCACKPDYLKLDDNSACVKICECPQMASSPDC 230
C P PC+ G CK + D N + C CPQ + +C
Sbjct: 477 GNL-CD-PNPCQNGGVCKETF---DRN---IYTCACPQGYTGWNC 513
>SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 468
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 385 RTCN-SLVARF-DCSKPKPCEEGCACKPDYLKLDDNSACVKICE 260
+TC ++V R +C+ P+P G C+P K + C K CE
Sbjct: 182 KTCGGAVVTRTRECNSPEPSNGGKPCEPSDAK-ETKEDCTKPCE 224
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = -3
Query: 529 KSCKAGCVCKEGYLKDDSG----KCVARENCPN*ECSGENEEFTNCTNPCPPRTCNS 371
KSC A C G K AR+ CP C + CTN CPP C+S
Sbjct: 987 KSCPAHCCLGPGKSMSSKQLEILKTFARKFCPE-SCRAK------CTNSCPPICCDS 1036
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 5.7
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGE---NEEFTNCTNPCPPRTCNSLVARFDCSKP 341
C CKEGYL C C C + + CP D P
Sbjct: 293 CHCKEGYL---GSHCEQMNFCYGNPCKNKGTCTPKLDGYECDCPEGFYGKNCDGVDRCYP 349
Query: 340 KPCEEGCACKPDYLKLDDNSACVKICECP 254
PC G C N+ IC+CP
Sbjct: 350 NPCANGATC--------FNAELTYICQCP 370
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 535 DQKSCKAGCVCKEGYLKDDS-GKCVAR 458
D S C CKEGY+ D S G CV +
Sbjct: 458 DNTSGSYECYCKEGYVGDGSIGNCVRK 484
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 27.9 bits (59), Expect = 5.7
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 17/105 (16%)
Frame = -3
Query: 511 CVCKEGY-LKDDSGKCVARENC--PN*ECSGENEEFTNCTNPCPPRTCNSLVARFDC--- 350
C C+ GY L+ D+ C C N CS + N ++C
Sbjct: 86 CSCRHGYALQADNTTCADINECVTSNGNCSHTCVNWEGGFNCTCAEGYALTYGGYECVDI 145
Query: 349 --SKPKPCEEGC---------ACKPDYLKLDDNSACVKICECPQM 248
KPC+ C +C+ + L DN+ C I EC ++
Sbjct: 146 DECSSKPCDHTCRNTNGSFVCSCREGFRLLSDNTTCRDIDECEEL 190
>SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*EC--SGENEEFTNCTN-PCPPRTCNSLVARFDCSKP 341
C+C + Y D C R C + C G E CP ++ D P
Sbjct: 21 CICPKDYRGKD---CQERNYCSSMPCLNGGSCVEIPGAFKCGCPFGFLGTVCEERDACHP 77
Query: 340 KPCEEGCACKPDYLKLDDNSACVKICE 260
PC+ G C + D S V +C+
Sbjct: 78 NPCKNGGTC----TRSDTESGFVCVCK 100
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 400 NPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYLKLDDNSACVKIC 263
N CP C+ A+ C KP + C C P Y D +C + C
Sbjct: 93 NSCPTPICSKGCAQGVCVKP----DNCTCHPGY----DGPSCDQAC 130
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/81 (25%), Positives = 31/81 (38%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*ECSGENEEFTNCTNPCPPRTCNSLVARFDCSKPKPC 332
C C +GY +CV + C + N N C +TCN+ + F C+
Sbjct: 586 CSCHQGYRLKGKHQCVDVDECSD-----------NSLNRCQ-QTCNNSIGSFKCT----- 628
Query: 331 EEGCACKPDYLKLDDNSACVK 269
C+P Y D +C K
Sbjct: 629 -----CRPGYHLAIDGFSCTK 644
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 271 KICECPQMASSPDCPKL*CKV 209
K+CE P+ +SS + P + CKV
Sbjct: 220 KVCEQPEASSSVEMPNIECKV 240
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 511 CVCKEGYLKDDSGKCVARENCPN*EC 434
CVC GYL D KC A C +C
Sbjct: 1224 CVCNPGYL-GDGRKCTADGTCEGVKC 1248
>SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 271 KICECPQMASSPDCPKL*CKV 209
K+CE P+ +SS + P + CKV
Sbjct: 220 KVCEQPEASSSVEMPNIECKV 240
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 279 AELSSSFK*SGLQAHPSSQGLGLLQSKRATSELQVRGGHGFVQLVN 416
AEL+ ++ + A QG L Q K +++LQ RG GFV V+
Sbjct: 140 AELADFYRFAVHYAREMLQGPELHQPKGVSNKLQYRGLEGFVAAVS 185
>SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08)
Length = 1213
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Frame = -3
Query: 403 TNPCPPRTCNSLVARFDC---SKPKP---CEEGCA-----CKPDYLKLDDNSAC 275
+ P PP+ C L C S+P P C C+ C+P L+L D AC
Sbjct: 1063 SRPSPPQVCTFLRIAGVCMLVSRPSPPQECGHVCSRLTKRCRPPALRLRDKPAC 1116
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -3
Query: 415 FTNCTNPCPPRTCNSLVARFDCSKPKPCEEGCACKPDYL--KLDDNSACVKICEC 257
F NC P PP +C+S R D C + D + NS C C
Sbjct: 2771 FDNCFQPDPPSSCSSNQFRCDSGHCISSSSKCDFETDCCDGSEERNSTCTAYTRC 2825
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,634,706
Number of Sequences: 59808
Number of extensions: 330063
Number of successful extensions: 1164
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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