Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0574
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.3  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -2

Query: 347 INLMVSVFLYR*RRSIY-INIFKTRGQPSSRTAVRSDRLCNKLSHCALALRSTVTRVILY 171
           + L   VFL   RR  + + +     +P       SD +  KLSHC   +      +IL 
Sbjct: 204 VRLCFQVFLEGERRGKFTVPLTPVVSEPIYDKKAMSDLMIVKLSHCNSYVDGGRNEIILL 263

Query: 170 YNKFIRVD 147
             K  + D
Sbjct: 264 CEKVAKED 271


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 67  YNRRVALGSFYELLE 23
           + R +ALG+FY+ L+
Sbjct: 190 FKRTIALGAFYQPLQ 204


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 135 ITRSIHTYELIVI 173
           IT ++ TYELIVI
Sbjct: 377 ITSAVVTYELIVI 389


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 469 FCNIATKFV*RCLFTALYHD 410
           F  + T+ V  CLF A  HD
Sbjct: 324 FALLITRIVCLCLFGAKVHD 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,977
Number of Sequences: 336
Number of extensions: 2368
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)