Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0574
         (546 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g12090.1 68414.m01399 protease inhibitor/seed storage/lipid t...    27   8.2  

>At1g12090.1 68414.m01399 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to 14 kDa
           polypeptide [Catharanthus roseus] GI:407410; contains
           Pfam protease inhibitor/seed storage/LTP family domain
           PF00234
          Length = 137

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 18  SPSRSS*KEPRATLLLYGCSNVIPNLSDI 104
           SPS  S K P+ TL L  C+NV+  L D+
Sbjct: 47  SPSSGSSKCPKDTLKLGVCANVLNGLLDL 75


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,588
Number of Sequences: 28952
Number of extensions: 197602
Number of successful extensions: 413
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)