Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0573
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 337 LRLYFFSCQFIDSRLQLLGELLNY*FF 257
           L +Y+F C FI   + LL  L  Y FF
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFF 170


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 337 LRLYFFSCQFIDSRLQLLGELLNY 266
           + ++F   Q ID +  LLG  +NY
Sbjct: 96  ITIFFDKIQRIDKQFGLLGYSINY 119


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 215 HPTYFGR 195
           HPTYFG+
Sbjct: 303 HPTYFGK 309


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 34  LTVVIFNMHLFLSTLVLEGR 93
           + V  FN+  ++ TL+LE R
Sbjct: 41  IVVSTFNIVFYMYTLILEER 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,434
Number of Sequences: 336
Number of extensions: 1723
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)