Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0569
         (442 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   2.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   4.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.4  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       22   8.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 83   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 184
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 16/71 (22%), Positives = 28/71 (39%)
 Frame = -3

Query: 233 ETLGVCERNIRRSGPVALVVGDDLHLPVLEDTNARVRGTQIDSYCGCFCHFXXXXXXXXX 54
           + LG  E+   RS PVA  V  ++      D ++ V G+ +    G F H          
Sbjct: 72  QALGQLEK--ARSKPVAFAVRTNVSYDGSLDDDSPVHGSAVSFEVGDFLHIKEKYDNNWW 129

Query: 53  XLKTTQQTCAI 21
             +  ++ C +
Sbjct: 130 IGRLVKEGCEV 140


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 133  QEYVVPRSIPTAGAFA 86
            Q+Y  PR++ +AG FA
Sbjct: 1244 QDYAPPRALMSAGGFA 1259


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 203 LCCVHRHRASHRRCRQEPGGDEP 271
           +CC+   R   RR    P  D+P
Sbjct: 322 VCCIESFRRRRRRDAFTPSKDDP 344


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,187
Number of Sequences: 2352
Number of extensions: 10362
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)