Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0568
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 200 2e-50
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 182 7e-45
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 181 1e-44
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 171 8e-42
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 167 2e-40
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 164 1e-39
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 162 5e-39
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 162 5e-39
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 158 8e-38
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 151 9e-36
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 148 1e-34
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 145 6e-34
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 145 6e-34
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 145 6e-34
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 143 3e-33
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 137 2e-31
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 134 1e-30
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 134 1e-30
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 132 4e-30
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 127 2e-28
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 127 2e-28
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 123 4e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 121 1e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 117 2e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 114 1e-24
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 114 1e-24
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 114 1e-24
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 114 1e-24
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 109 4e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 105 6e-22
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 104 2e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 100 2e-20
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 99 9e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 2e-17
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 89 7e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 1e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 87 3e-16
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 81 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 79 8e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 76 5e-13
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 71 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 2e-11
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 69 8e-11
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 3e-10
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 67 3e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 65 1e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 64 2e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 63 5e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 63 5e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 63 5e-09
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 62 1e-08
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 62 1e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 61 2e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 61 2e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 61 2e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 60 3e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 7e-08
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 59 7e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 57 3e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 57 4e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 56 6e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 56 8e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 54 2e-06
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 54 3e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 53 6e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 50 4e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 50 5e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 49 7e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 49 7e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 49 9e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 48 2e-04
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 48 2e-04
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 47 3e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 47 3e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 46 5e-04
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 46 5e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 46 9e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 45 0.001
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 45 0.002
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 43 0.006
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 43 0.006
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 41 0.019
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 40 0.044
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.076
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 38 0.18
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 38 0.18
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.41
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 36 0.54
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 36 0.71
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 34 2.2
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 2.9
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 3.8
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 5.0
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 6.6
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.7
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 200 bits (488), Expect = 2e-50
Identities = 111/195 (56%), Positives = 117/195 (60%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
+ T HKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 5 YSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIF 64
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG T
Sbjct: 65 FMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWT 124
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV A
Sbjct: 125 VYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWA 184
Query: 545 VGITAFLLLLSLPVL 589
VGITAFLLLLSLPVL
Sbjct: 185 VGITAFLLLLSLPVL 199
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 182 bits (442), Expect = 7e-45
Identities = 98/163 (60%), Positives = 105/163 (64%)
Frame = +2
Query: 101 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 280
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 281 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 460
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 461 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
SFDQ+PLF+ AVGITA LLLLSLPVL
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVL 175
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 181 bits (441), Expect = 1e-44
Identities = 101/185 (54%), Positives = 118/185 (63%)
Frame = -3
Query: 585 TGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTD 406
TGS++N+K AV T TN G S I +R I+E PAKC+EKI STD
Sbjct: 34 TGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTD 93
Query: 405 LPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTN 226
P CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTN
Sbjct: 94 APACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTN 153
Query: 225 QFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPK 46
QFPNPP KA AVT+ L I S PI PG PNSARIKSL DVP +P PK
Sbjct: 154 QFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPK 212
Query: 45 IKYNV 31
+KYNV
Sbjct: 213 MKYNV 217
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 171 bits (417), Expect = 8e-42
Identities = 99/195 (50%), Positives = 109/195 (55%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F T HKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 9 FSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIF 68
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 69 FMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWT 128
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +
Sbjct: 129 VYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWS 188
Query: 545 VGITAFLLLLSLPVL 589
V ITA LLLLSLPVL
Sbjct: 189 VLITAVLLLLSLPVL 203
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 167 bits (405), Expect = 2e-40
Identities = 95/195 (48%), Positives = 106/195 (54%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F T HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV A
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187
Query: 545 VGITAFLLLLSLPVL 589
V +TA LLLLSLPVL
Sbjct: 188 VLVTAVLLLLSLPVL 202
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 164 bits (399), Expect = 1e-39
Identities = 93/195 (47%), Positives = 106/195 (54%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F T HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187
Query: 545 VGITAFLLLLSLPVL 589
V +TA LLLLSLPVL
Sbjct: 188 VLVTAVLLLLSLPVL 202
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 162 bits (394), Expect = 5e-39
Identities = 93/191 (48%), Positives = 104/191 (54%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 557 AFLLLLSLPVL 589
A LLLLSLPVL
Sbjct: 181 AVLLLLSLPVL 191
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 162 bits (394), Expect = 5e-39
Identities = 92/195 (47%), Positives = 106/195 (54%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F T HKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIF 67
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG T
Sbjct: 68 FMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWT 127
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +
Sbjct: 128 VYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWS 187
Query: 545 VGITAFLLLLSLPVL 589
V ITA LLLLSLPVL
Sbjct: 188 VLITAVLLLLSLPVL 202
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 158 bits (384), Expect = 8e-38
Identities = 88/195 (45%), Positives = 105/195 (53%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F HKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N VPL++GAPD+AFPR+NNI F +VE GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
VYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Query: 545 VGITAFLLLLSLPVL 589
V ITA LLLLSLPVL
Sbjct: 189 VLITAILLLLSLPVL 203
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 151 bits (367), Expect = 9e-36
Identities = 83/163 (50%), Positives = 95/163 (58%)
Frame = +2
Query: 101 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 280
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 281 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 460
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 461 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ + LFV +V ITA LLLLSLPVL
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVL 185
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 148 bits (358), Expect = 1e-34
Identities = 84/197 (42%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 178
F T HKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 9 FSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLM 68
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N VP+++GAPD+AFPR+NNI F +VE G+GTG
Sbjct: 69 IFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTG 128
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV
Sbjct: 129 WTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFV 188
Query: 539 *AVGITAFLLLLSLPVL 589
+V +TAFLLLLSLPVL
Sbjct: 189 WSVLVTAFLLLLSLPVL 205
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 145 bits (352), Expect = 6e-34
Identities = 87/197 (44%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
Query: 539 *AVGITAFLLLLSLPVL 589
A+ +TA LLLLSLPVL
Sbjct: 186 WAIFVTAILLLLSLPVL 202
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 145 bits (352), Expect = 6e-34
Identities = 87/197 (44%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
Query: 539 *AVGITAFLLLLSLPVL 589
A+ +TA LLLLSLPVL
Sbjct: 186 WAIFVTAILLLLSLPVL 202
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 145 bits (352), Expect = 6e-34
Identities = 87/197 (44%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
Query: 539 *AVGITAFLLLLSLPVL 589
A+ +TA LLLLSLPVL
Sbjct: 186 WAIFVTAILLLLSLPVL 202
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 143 bits (346), Expect = 3e-33
Identities = 81/197 (41%), Positives = 104/197 (52%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
F T HKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 14 FSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLM 73
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N LVP+++G+PD+AFPR+NNI F +VE G GTG
Sbjct: 74 IFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTG 133
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLFV
Sbjct: 134 WTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFV 193
Query: 539 *AVGITAFLLLLSLPVL 589
++ +TAFLLLL++PVL
Sbjct: 194 WSILVTAFLLLLAVPVL 210
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 137 bits (331), Expect = 2e-31
Identities = 76/163 (46%), Positives = 92/163 (56%)
Frame = +2
Query: 101 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 280
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 281 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 460
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 461 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ D++ LF +V ITA LLLLSLPVL
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVL 186
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 134 bits (325), Expect = 1e-30
Identities = 83/197 (42%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTG 126
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Query: 539 *AVGITAFLLLLSLPVL 589
++ ITAFLLLLSLPVL
Sbjct: 187 WSIFITAFLLLLSLPVL 203
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 134 bits (325), Expect = 1e-30
Identities = 83/197 (42%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTG 126
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Query: 539 *AVGITAFLLLLSLPVL 589
++ ITAFLLLLSLPVL
Sbjct: 187 WSIFITAFLLLLSLPVL 203
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 132 bits (320), Expect = 4e-30
Identities = 81/197 (41%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N ++PL++GA D++FPRIN+I F +VE+GAGTG
Sbjct: 67 IFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTG 126
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLFV
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFV 186
Query: 539 *AVGITAFLLLLSLPVL 589
A+ ITAFLLLLSLPVL
Sbjct: 187 WAIFITAFLLLLSLPVL 203
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 127 bits (307), Expect = 2e-28
Identities = 79/191 (41%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Frame = +2
Query: 20 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 196
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPP
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPP 132
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LS +H G SVDLAIF LHL+GISS +L LF AV IT
Sbjct: 133 LSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVIT 192
Query: 557 AFLLLLSLPVL 589
A LLLLSLPVL
Sbjct: 193 AVLLLLSLPVL 203
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 127 bits (306), Expect = 2e-28
Identities = 78/197 (39%), Positives = 97/197 (49%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDI LY EL PG L G++Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILM 66
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N ++PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTG 126
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV
Sbjct: 127 WTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Query: 539 *AVGITAFLLLLSLPVL 589
A+ ITA LLLL+LPVL
Sbjct: 187 WAILITAVLLLLTLPVL 203
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 123 bits (296), Expect = 4e-27
Identities = 78/197 (39%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
F T KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTG 131
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 132 WTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFA 191
Query: 539 *AVGITAFLLLLSLPVL 589
AV TA LLLLSLPVL
Sbjct: 192 WAVLFTAILLLLSLPVL 208
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 121 bits (291), Expect = 1e-26
Identities = 72/191 (37%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Frame = +2
Query: 20 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 196
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPP
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPP 158
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LS +H VDL IF LHL+GISS +L LF AV IT
Sbjct: 159 LSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVIT 218
Query: 557 AFLLLLSLPVL 589
A LLLLSLPVL
Sbjct: 219 AVLLLLSLPVL 229
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 117 bits (282), Expect = 2e-25
Identities = 71/197 (36%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
F T HK IG LY EL PG L G+ YN I T H
Sbjct: 10 FTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLM 69
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N VP+++GAPD++FPR+NN F E G GTG
Sbjct: 70 LFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTG 129
Query: 359 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
TVYPPLSS +H G SVDL IFS HL GI S LPLFV
Sbjct: 130 WTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFV 189
Query: 539 *AVGITAFLLLLSLPVL 589
+V +T+FL+++++PVL
Sbjct: 190 WSVAVTSFLVIVAIPVL 206
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 114 bits (275), Expect = 1e-24
Identities = 61/160 (38%), Positives = 88/160 (55%)
Frame = +2
Query: 110 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 289
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 290 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 469
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 470 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPLFV +V ITA L++L+LPVL
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 114 bits (275), Expect = 1e-24
Identities = 61/160 (38%), Positives = 88/160 (55%)
Frame = +2
Query: 110 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 289
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 290 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 469
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 470 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPLFV +V ITA L++L+LPVL
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 114 bits (275), Expect = 1e-24
Identities = 61/160 (38%), Positives = 88/160 (55%)
Frame = +2
Query: 110 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 289
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 290 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 469
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 470 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPLFV +V ITA L++L+LPVL
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 114 bits (275), Expect = 1e-24
Identities = 61/160 (38%), Positives = 88/160 (55%)
Frame = +2
Query: 110 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 289
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 290 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 469
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 470 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPLFV +V ITA L++L+LPVL
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 109 bits (263), Expect = 4e-23
Identities = 63/153 (41%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 187
T KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 38 TNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFF 97
Query: 188 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 367
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 98 MVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTL 157
Query: 368 ----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 454
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 158 LKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 105 bits (253), Expect = 6e-22
Identities = 78/213 (36%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY-- 145
T HKDIGTLY AEL PG + D DQ Y
Sbjct: 34 TNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHL 93
Query: 146 -NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 322
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 94 WNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLL 153
Query: 323 XXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXX 490
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 154 GSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTIL 212
Query: 491 XXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ ++PLFV +V +TAFLLLL+LPVL
Sbjct: 213 NMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVL 245
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 104 bits (249), Expect = 2e-21
Identities = 62/118 (52%), Positives = 69/118 (58%)
Frame = +2
Query: 236 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 415
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 416 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
LAIFSLH+AG+ S + ++PLFV AV ITA LLLLSLPVL
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVL 121
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 100 bits (240), Expect = 2e-20
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = +2
Query: 98 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 271
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 272 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 451
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 452 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
S + ++PLF +V +TA+LLLLSLPVL
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVL 308
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 98.7 bits (235), Expect = 9e-20
Identities = 57/124 (45%), Positives = 65/124 (52%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 11 TNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXM 70
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 370
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVY
Sbjct: 71 XMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVY 130
Query: 371 PPLS 382
PPL+
Sbjct: 131 PPLA 134
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.1 bits (216), Expect = 2e-17
Identities = 58/193 (30%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 190
HK IGT Y EL +PG G Q+YN+++T H
Sbjct: 21 HKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFL 80
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 370
N ++PL+LGAP++AFPR+N + F + G G+ T Y
Sbjct: 81 VMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFY 140
Query: 371 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 550
PPLS S+D I LH GI S + DQ+ +FV
Sbjct: 141 PPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSY 199
Query: 551 ITAFLLLLSLPVL 589
+T+FLL+LS+PVL
Sbjct: 200 LTSFLLVLSVPVL 212
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 89.0 bits (211), Expect = 7e-17
Identities = 51/158 (32%), Positives = 70/158 (44%)
Frame = +2
Query: 116 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 295
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 296 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 475
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 476 XXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
SF LF+ A ITA LL+++LPVL
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVL 205
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 1e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +2
Query: 101 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 280
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 281 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 454
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 87.0 bits (206), Expect = 3e-16
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 14 HKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVM 73
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N +PL++ D++ PR+NN+ + G G G T+YPP
Sbjct: 74 PTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPP 133
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGI 553
LS++ G +DLA+FSLH+AG+SS F L P+ + +
Sbjct: 134 LSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFG 193
Query: 554 TAFLLLLSLPVL 589
T+ LL+ S+PVL
Sbjct: 194 TSILLVTSVPVL 205
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/131 (38%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 359 *TVYPPLSSNI 391
TV LS I
Sbjct: 126 WTVKCKLSQII 136
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 236 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 415
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 416 LAIFS 430
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 79.0 bits (186), Expect = 8e-14
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 178
F T HKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLM 69
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N VP+++G+PD+AFPR+NNI F +VE G G+G
Sbjct: 70 IFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSG 129
Query: 359 *TV 367
TV
Sbjct: 130 WTV 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 76.2 bits (179), Expect = 5e-13
Identities = 73/192 (38%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Frame = +2
Query: 17 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 193
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 194 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 373
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 374 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 553
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 554 TAFLLLLSLPVL 589
L+LS PVL
Sbjct: 181 XXXXLILSXPVL 192
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 71.3 bits (167), Expect = 2e-11
Identities = 45/151 (29%), Positives = 69/151 (45%)
Frame = +2
Query: 137 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 316
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 317 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 496
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 497 XXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
D++ ++ +T+FLLLLSLPV+
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVV 208
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = +2
Query: 374 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 553
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 554 TAFLLLLSLPVL 589
T LLLLSLPVL
Sbjct: 132 TTVLLLLSLPVL 143
Score = 35.1 bits (77), Expect = 1.2
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 208 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 333
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 68.9 bits (161), Expect = 8e-11
Identities = 46/131 (35%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
F T KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTG 131
Query: 359 *TVYPPLSSNI 391
TV SS +
Sbjct: 132 WTVKKICSSKM 142
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Frame = +2
Query: 140 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 319
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 320 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 496
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 497 XXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ L + ++ IT+ +LLL+LPVL
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVL 208
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 66.9 bits (156), Expect = 3e-10
Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 8/199 (4%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HKDIG LY EL +PG + + YN+++T+H
Sbjct: 94 HKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFAT 153
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TV 367
N L+PL++GA D+AFPRIN I F I E A TG T+
Sbjct: 154 PIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTM 212
Query: 368 YPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 532
Y PLS N A+ G VDL + LHL+G+S+ S+ L +
Sbjct: 213 YTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDI 270
Query: 533 FV*AVGITAFLLLLSLPVL 589
F + + L+L + P+L
Sbjct: 271 FSWTILTQSGLILFAFPLL 289
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.9 bits (151), Expect = 1e-09
Identities = 51/191 (26%), Positives = 74/191 (38%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG ++ EL PG I D YN + T H
Sbjct: 35 HKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMI 94
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L+P+++GA D+AFP++N + F +V+ GA TG T Y P
Sbjct: 95 PAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTP 153
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
S+ + V L F L G SS + +LPLFV ++ T
Sbjct: 154 YSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYAT 210
Query: 557 AFLLLLSLPVL 589
+ + +L+ PVL
Sbjct: 211 SVIQILATPVL 221
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 64.1 bits (149), Expect = 2e-09
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXX 178
T HK IG LY EL G I + IYN +T H
Sbjct: 16 TSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIM 75
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGT 355
N L+P+++G +++ PR+N I F + + +
Sbjct: 76 LFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISS 135
Query: 356 G*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 532
G T+YPPLS+ A G ++DL++ +H+ GISS +F + +
Sbjct: 136 GWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINI 195
Query: 533 FV*AVGITAFLLLLSLPVL 589
+ ++ +T+ LL+ SLP+L
Sbjct: 196 YNFSIIVTSILLIGSLPIL 214
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 62.9 bits (146), Expect = 5e-09
Identities = 49/191 (25%), Positives = 72/191 (37%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG ++ EL PG I D YN T H
Sbjct: 42 HKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMI 101
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N ++PL+LGA D+AFPR+N + ++ G TG T Y P
Sbjct: 102 PAIPAVFGNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTP 160
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
S AH +V +F + G SS ++ ++PLFV A+ T
Sbjct: 161 YS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYAT 217
Query: 557 AFLLLLSLPVL 589
+ + +L+ PV+
Sbjct: 218 SCIQVLATPVI 228
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.9 bits (146), Expect = 5e-09
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 1/150 (0%)
Frame = +2
Query: 143 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 322
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 323 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 499
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 500 XXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
++ +LPL + + +TA L L +PVL
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVL 235
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 62.9 bits (146), Expect = 5e-09
Identities = 45/191 (23%), Positives = 69/191 (36%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK +G +Y A+L P + D YN I T H
Sbjct: 53 HKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAM 112
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N +VPL +GA D+AFP +NN+ F ++ G T Y P
Sbjct: 113 PFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMP 171
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
L+SN G + + L +AGI + + ++P+F IT
Sbjct: 172 LASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLIT 231
Query: 557 AFLLLLSLPVL 589
+++ + PVL
Sbjct: 232 MVIIVFAFPVL 242
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 61.7 bits (143), Expect = 1e-08
Identities = 54/191 (28%), Positives = 74/191 (38%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
H D+ LY +L P L D +YN VT H
Sbjct: 9 HIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAM 66
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L+P PD+ FPR+N + F ++ + A G T YPP
Sbjct: 67 PTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPP 121
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LSS SV+ ++FSLHLAGI+S + L LF ++ +
Sbjct: 122 LSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLV 175
Query: 557 AFLLLLSLPVL 589
+ LL+LSLPVL
Sbjct: 176 SLLLVLSLPVL 186
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 178
+ T KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLM 66
Query: 179 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 358
N L+PL++GA D++F R+NNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTG 126
Query: 359 *TV 367
TV
Sbjct: 127 WTV 129
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 61.3 bits (142), Expect = 2e-08
Identities = 48/194 (24%), Positives = 71/194 (36%), Gaps = 1/194 (0%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HK +G +Y AEL PG ++ +N + T H
Sbjct: 36 TDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLY 95
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TV 367
N ++PL +GAPD+AFPR+N F + GA G T+
Sbjct: 96 GTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTM 154
Query: 368 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 547
Y PLS I G D+ I + GI S + ++P+F +
Sbjct: 155 YSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNI 214
Query: 548 GITAFLLLLSLPVL 589
+ + L LL P+L
Sbjct: 215 FVVSVLALLIFPLL 228
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 60.9 bits (141), Expect = 2e-08
Identities = 47/191 (24%), Positives = 70/191 (36%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG +Y +L P + +++N + T H
Sbjct: 32 HKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGM 91
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N VPL++GA D+AFPR+N+ F + + G Y P
Sbjct: 92 PVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVP 150
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LSS + VD I L + GI S S ++PLFV + +
Sbjct: 151 LSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQ 210
Query: 557 AFLLLLSLPVL 589
A L++L+LP L
Sbjct: 211 AILIILALPAL 221
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 60.9 bits (141), Expect = 2e-08
Identities = 49/194 (25%), Positives = 72/194 (37%), Gaps = 1/194 (0%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HKDIG LY +L P S Y VT H
Sbjct: 19 TDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWF 78
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TV 367
N +VPL +GA D+AFPR+N + + E+GA G T+
Sbjct: 79 ASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTL 137
Query: 368 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 547
Y PL++ I G +DLA ++ L +S + ++P+F ++
Sbjct: 138 YAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSI 197
Query: 548 GITAFLLLLSLPVL 589
T L+L + P L
Sbjct: 198 LFTVILMLWAFPPL 211
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 60.5 bits (140), Expect = 3e-08
Identities = 46/193 (23%), Positives = 69/193 (35%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HK IG +Y +LG P + +YN + T H
Sbjct: 29 TDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLG 88
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 370
N +VPL++GA D+AFPR+N + V G Y
Sbjct: 89 LMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAY 147
Query: 371 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 550
PL+ VD I + L G++S + +++PLFV
Sbjct: 148 APLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQL 207
Query: 551 ITAFLLLLSLPVL 589
+ AF+L+ + PVL
Sbjct: 208 VVAFILIFAFPVL 220
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 332 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 454
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 59.3 bits (137), Expect = 7e-08
Identities = 54/195 (27%), Positives = 69/195 (35%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F HK IG Y EL P ++YN ++T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 364
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
YPPLS G +L I SL L G SS +PLF A
Sbjct: 141 SYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWA 198
Query: 545 VGITAFLLLLSLPVL 589
+ T+ L+LLS PVL
Sbjct: 199 MLATSSLILLSTPVL 213
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 57.2 bits (132), Expect = 3e-07
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Frame = +2
Query: 137 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 316
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 317 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 484
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 485 XXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPL + A+ ITA L +LPVL
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVL 240
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 56.8 bits (131), Expect = 4e-07
Identities = 55/191 (28%), Positives = 71/191 (37%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG LY L +P + +YN +VT H
Sbjct: 110 HKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLM 169
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N +P+ L D+ PR+N++ G G G T+YPP
Sbjct: 170 PILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPP 227
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LS G VD +FSLHLAG+SS SF+ + V A T
Sbjct: 228 LSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAYLFT 281
Query: 557 AFLLLLSLPVL 589
+ LLLLSLPVL
Sbjct: 282 SVLLLLSLPVL 292
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 56.0 bits (129), Expect = 6e-07
Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 1/192 (0%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXX 193
HK IG Y +L P + IG D+ YN I T H
Sbjct: 29 HKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFA 87
Query: 194 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 373
LVPL++G IAFPR+N + V+ G G Y
Sbjct: 88 VPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYV 146
Query: 374 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 553
PLS G+ D+ + +S+ S D++PLFV ++ +
Sbjct: 147 PLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLV 206
Query: 554 TAFLLLLSLPVL 589
T+FL++L++P +
Sbjct: 207 TSFLVILAMPAI 218
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 55.6 bits (128), Expect = 8e-07
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HKDIG LY EL + +YN ++T+H
Sbjct: 68 HKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGT 127
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVY 370
N +PL++ A D+AFPRIN I F ++ A T T+Y
Sbjct: 128 PMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMY 186
Query: 371 PPLSSNIAHRGRSVDLAIFSLHLAGISS 454
PLS ++ +VD+ + LHL G+S+
Sbjct: 187 TPLSLQMS--SPAVDMMMLGLHLTGVSA 212
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.0 bits (124), Expect = 2e-06
Identities = 49/198 (24%), Positives = 71/198 (35%), Gaps = 3/198 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 184
F T K IG Y EL P + + D +YN + T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 185 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG* 361
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 362 TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 535
YPP+S + + H L I ++ L+GISS F ++P+F
Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210
Query: 536 V*AVGITAFLLLLSLPVL 589
V + L+ LP L
Sbjct: 211 VWTAWAAQTIQLIGLPAL 228
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 53.6 bits (123), Expect = 3e-06
Identities = 42/159 (26%), Positives = 62/159 (38%)
Frame = +2
Query: 113 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 292
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 293 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 472
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 473 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+F + LFV + + L+ +P L
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSL 158
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 52.8 bits (121), Expect = 6e-06
Identities = 51/197 (25%), Positives = 73/197 (37%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXX 181
F T HK +G LY EL G I DD +YNT + H
Sbjct: 10 FTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMI 69
Query: 182 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 361
N +PL++GA D+AFPR+N + + +
Sbjct: 70 LAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMW 129
Query: 362 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 541
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 542 AVGITAFLL-LLSLPVL 589
A + AF+L L+ +PVL
Sbjct: 187 AT-LAAFVLQLIFVPVL 202
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 50.0 bits (114), Expect = 4e-05
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 1/189 (0%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG +Y +L P + + YN I+T H
Sbjct: 24 HKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFII 83
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYP 373
N +VPL+LGA D+A PR+N + GA G T Y
Sbjct: 84 QAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYY 143
Query: 374 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 553
P S A VD + ++ L G SS S ++P++V +V
Sbjct: 144 PFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFA 200
Query: 554 TAFLLLLSL 580
+ L L SL
Sbjct: 201 ASVLNLFSL 209
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 49.6 bits (113), Expect = 5e-05
Identities = 40/191 (20%), Positives = 66/191 (34%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK I LY +L P + Q YN ++T H
Sbjct: 24 HKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAM 83
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N +VPL +GA D++FP +N + F + G T Y
Sbjct: 84 PLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYAS 142
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LS + +G +D + L ++G+ + ++ +LPLF +
Sbjct: 143 LS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVA 200
Query: 557 AFLLLLSLPVL 589
+ L+L + P L
Sbjct: 201 SALILFAFPPL 211
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 49.2 bits (112), Expect = 7e-05
Identities = 40/191 (20%), Positives = 65/191 (34%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
H D+G ++ A+L P S + YN + T H
Sbjct: 29 HTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAI 88
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
L+P +LG+ D+AFPR+ F + +G +YPP
Sbjct: 89 PVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPP 147
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
LSS + G + D + + IS+ S ++P+F +T
Sbjct: 148 LSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVT 207
Query: 557 AFLLLLSLPVL 589
A ++L P L
Sbjct: 208 AVMILTGFPPL 218
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 49.2 bits (112), Expect = 7e-05
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 397
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 398 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 577
+ VDL + + +AG SS + LF +V + L++ +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 578 LPVL 589
LP L
Sbjct: 204 LPPL 207
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 48.8 bits (111), Expect = 9e-05
Identities = 31/123 (25%), Positives = 53/123 (43%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 400
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 401 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 580
VD +S+ ++GI + F+++ +F+ + L+L+S
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 581 PVL 589
P+L
Sbjct: 239 PIL 241
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 48.0 bits (109), Expect = 2e-04
Identities = 47/194 (24%), Positives = 71/194 (36%), Gaps = 1/194 (0%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXX 181
F T H D+G LY AEL PG+ I D +N + T H
Sbjct: 16 FSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLI 75
Query: 182 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 361
N VP+++ D+A+P++N I F + T
Sbjct: 76 FLFILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-- 132
Query: 362 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 541
PP S I+ G + D+ IF L + GISS S Q+PL
Sbjct: 133 ---PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAW 188
Query: 542 AVGITAFLLLLSLP 583
+ ++ ++L++LP
Sbjct: 189 SYLSSSLIVLVALP 202
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 47.6 bits (108), Expect = 2e-04
Identities = 33/123 (26%), Positives = 51/123 (41%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 400
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 401 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 580
G VD I+SL LA + S +PLF TA +++ ++
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 581 PVL 589
P L
Sbjct: 264 PPL 266
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 47.2 bits (107), Expect = 3e-04
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Frame = +2
Query: 131 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 310
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 311 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 478
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 479 XXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
SF +LPL + A ITA + LLS PVL
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVL 254
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 47.2 bits (107), Expect = 3e-04
Identities = 33/123 (26%), Positives = 49/123 (39%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 400
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 401 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 580
G VD I++L L+G+ + +P+F L++ S
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 581 PVL 589
P+L
Sbjct: 244 PIL 246
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 46.4 bits (105), Expect = 5e-04
Identities = 33/123 (26%), Positives = 49/123 (39%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 400
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 401 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 580
VD I++L ++GI + +P+F L+ S
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 581 PVL 589
P+L
Sbjct: 245 PIL 247
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 46.4 bits (105), Expect = 5e-04
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 3/154 (1%)
Frame = +2
Query: 137 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 316
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 317 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 487
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 488 XXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+F +LP+ + + ITA L +LPVL
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVL 243
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 45.6 bits (103), Expect = 9e-04
Identities = 37/191 (19%), Positives = 67/191 (35%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
H D+G ++ A+L +P S + Y + T H
Sbjct: 29 HTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAI 88
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
L+P +LG+ D+A+PR++ F + +G +YPP
Sbjct: 89 PMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPP 147
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 556
L+S + G + D + + IS+ S D++P++ +T
Sbjct: 148 LASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVT 207
Query: 557 AFLLLLSLPVL 589
A ++L P L
Sbjct: 208 ATMILTGFPPL 218
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/121 (23%), Positives = 51/121 (42%)
Frame = +2
Query: 227 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 406
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 407 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPV 586
S D + + LA I+S S ++P+ + + TAF++ ++ P
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 587 L 589
L
Sbjct: 244 L 244
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/121 (23%), Positives = 50/121 (41%)
Frame = +2
Query: 227 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 406
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 407 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPV 586
+D + IS+ S +++P+FV AV + +F+++ +LP
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 587 L 589
L
Sbjct: 225 L 225
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.7 bits (96), Expect = 0.006
Identities = 42/190 (22%), Positives = 62/190 (32%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HK IG LY +L P + YN ++T HA
Sbjct: 30 TDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFF 89
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 370
N +PL LG D+A PR+N G T Y
Sbjct: 90 LIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFY 149
Query: 371 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 550
PL+ + G SV + ++ L G+ S ++P+F ++
Sbjct: 150 YPLTMDGNQTGVSVFMV--AVILNGLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIF 207
Query: 551 ITAFLLLLSL 580
T+ L LL+L
Sbjct: 208 ATSILQLLTL 217
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 42.7 bits (96), Expect = 0.006
Identities = 41/195 (21%), Positives = 66/195 (33%), Gaps = 2/195 (1%)
Frame = +2
Query: 11 TRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 190
T HKDIG LY EL + G+ + YN V+ H
Sbjct: 20 TNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWF 79
Query: 191 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 370
N LVPL +GA D+AFPR+N + + G T+Y
Sbjct: 80 ISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMY 138
Query: 371 PPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
PL+ + I G + +L + + +P+F +
Sbjct: 139 APLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLS 198
Query: 545 VGITAFLLLLSLPVL 589
+ +T +++L + L
Sbjct: 199 INLTVWMMLFAFAAL 213
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 41.1 bits (92), Expect = 0.019
Identities = 40/167 (23%), Positives = 60/167 (35%), Gaps = 4/167 (2%)
Frame = +2
Query: 101 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 277
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 278 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 448
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 449 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
+ +LPL V + + LL+ P L
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPAL 232
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 39.9 bits (89), Expect = 0.044
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 4/193 (2%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG +Y +L PG + + +N + T HA
Sbjct: 29 HKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVM 88
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG*T 364
N +PL++GA D+AFPR+N + ++ G G
Sbjct: 89 PLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWF 147
Query: 365 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 544
Y L+S G D L L GI + + ++P+FV
Sbjct: 148 GYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWT 207
Query: 545 VGITAFLLLLSLP 583
+T+ +++ + P
Sbjct: 208 TLVTSAIIIFAFP 220
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.076
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 265 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 435
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 37.9 bits (84), Expect = 0.18
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 221 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 397
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 398 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 577
G +L +L L+G+SS + ++PLFV TA L++++
Sbjct: 139 YGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFVWGFFTTAILMIIA 196
Query: 578 LPVL 589
+P L
Sbjct: 197 MPSL 200
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.9 bits (84), Expect = 0.18
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 101 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 274
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 275 NNIRF 289
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.41
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 403
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 404 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 547
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 36.3 bits (80), Expect = 0.54
Identities = 32/156 (20%), Positives = 55/156 (35%)
Frame = +2
Query: 122 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 301
L+G D YN I T H L+P +L A D+ FPR++
Sbjct: 75 LVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYI 132
Query: 302 XXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 481
+ G +YPPL+ G + D + + IS+
Sbjct: 133 VGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIV 192
Query: 482 XXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPVL 589
S ++P+F A+ I A +++++ P +
Sbjct: 193 GTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAV 228
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 35.9 bits (79), Expect = 0.71
Identities = 37/174 (21%), Positives = 57/174 (32%)
Frame = +2
Query: 17 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 196
HK IG Y +L P + + Y+++ T H
Sbjct: 49 HKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYAL 108
Query: 197 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 376
N L PL+LG+ D+AFPR+ + + G Y P
Sbjct: 109 PVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVP 167
Query: 377 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 538
L+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 168 LTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 34.3 bits (75), Expect = 2.2
Identities = 24/121 (19%), Positives = 47/121 (38%)
Frame = +2
Query: 227 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 406
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 407 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPV 586
+ D + + IS+ + ++P+F A+ + A +++ + P
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 587 L 589
+
Sbjct: 287 V 287
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 33.9 bits (74), Expect = 2.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 5 FGTRHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 148
F T HKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 3.8
Identities = 24/121 (19%), Positives = 47/121 (38%)
Frame = +2
Query: 227 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 406
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 407 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSLPV 586
D+ + L ++S + +PL+ V + ++L + P
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 587 L 589
L
Sbjct: 244 L 244
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 107 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 286
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 287 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 385
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 6.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 25 YWNIIFYFWYLIRNNWNIFKTFNS 96
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 298 TPLPYIINFKKNCRKWCRN 354
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,105,771
Number of Sequences: 1657284
Number of extensions: 6830793
Number of successful extensions: 14192
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 13472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14055
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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