Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0566
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   2.4  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    20   5.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   5.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    20   5.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    20   5.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   7.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    19   9.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 PVNCWACSSNVNPLCNDPFNIRIDTGNS 221
           P N   C  +  PLCND  N  +  G S
Sbjct: 144 PENVDGCQKH--PLCNDDPNGNVPLGKS 169


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 52  SEFIVHHNGKTIVSWCPFCFL 114
           S+ +  +NG+TI+  CP  F+
Sbjct: 6   SKVVEINNGETIIISCPGGFV 26


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 29  LSVFSDNLVSLLCIIM 76
           LSVF   LVS++ IIM
Sbjct: 215 LSVFVYTLVSVILIIM 230


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 317 VFLFFLAYRLRSCQ 276
           +FL F++Y +  CQ
Sbjct: 188 IFLMFVSYNIYVCQ 201


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 317 VFLFFLAYRLRSCQ 276
           +FL F++Y +  CQ
Sbjct: 114 IFLMFVSYNIYVCQ 127


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 184 LHSGFTLDE 158
           L SGFTLDE
Sbjct: 661 LSSGFTLDE 669


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 221 RIPGVDTDIKRIVAQRI 171
           R PG+D  +KR + Q +
Sbjct: 123 RFPGLDPVVKRRLLQHL 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,749
Number of Sequences: 336
Number of extensions: 1487
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)