Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0566
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein. 32 0.33
AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein. 32 0.33
AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein. 32 0.33
AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein. 32 0.33
AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein. 32 0.33
AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein. 32 0.33
AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein. 32 0.33
AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin prec... 32 0.33
AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin prec... 32 0.33
AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein. 32 0.33
AF242519-1|AAF99600.1| 461|Homo sapiens zinc finger protein SBZ... 28 5.4
BC111778-1|AAI11779.1| 395|Homo sapiens WD repeat domain 21C pr... 28 7.2
AK093094-1|BAC04051.1| 395|Homo sapiens protein ( Homo sapiens ... 28 7.2
BC104225-1|AAI04226.1| 396|Homo sapiens WD repeat domain 21B pr... 27 9.5
BC104224-1|AAI04225.1| 396|Homo sapiens WD repeat domain 21B pr... 27 9.5
BC052943-1|AAH52943.1| 396|Homo sapiens WD repeat domain 21B pr... 27 9.5
BC035027-1|AAH35027.1| 376|Homo sapiens WDR21B protein protein. 27 9.5
>BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin
precursor protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin
precursor protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 144 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 254
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF242519-1|AAF99600.1| 461|Homo sapiens zinc finger protein SBZF3
protein.
Length = 461
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 DSEPVNCWACSSNVNPLCND-PFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKK 305
+ + C C N LC+ + +I TG ++ E C K+ FPYLT K + +
Sbjct: 264 EKKTYRCEECGKAFN-LCSVLTKHKKIHTGEKP-YKCEECGKSF-KLFPYLTQHKRIHSR 320
Query: 306 EKKY 317
EK Y
Sbjct: 321 EKPY 324
>BC111778-1|AAI11779.1| 395|Homo sapiens WD repeat domain 21C
protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 203 YRHREFLFVPPRKLRQECWSYLSLFDS 283
Y H+ L+VP RK+ CW+ L+ DS
Sbjct: 115 YPHKT-LYVPNRKVNSMCWASLNHLDS 140
>AK093094-1|BAC04051.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ35775 fis, clone TESTI2005307. ).
Length = 395
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 203 YRHREFLFVPPRKLRQECWSYLSLFDS 283
Y H+ L+VP RK+ CW+ L+ DS
Sbjct: 115 YPHKT-LYVPNRKVNSMCWASLNHLDS 140
>BC104225-1|AAI04226.1| 396|Homo sapiens WD repeat domain 21B
protein.
Length = 396
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 221 LFVPPRKLRQECWSYLSLFDS 283
L+VP RK++ CW+ L+ DS
Sbjct: 120 LYVPNRKVKSLCWASLNQLDS 140
>BC104224-1|AAI04225.1| 396|Homo sapiens WD repeat domain 21B
protein.
Length = 396
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 221 LFVPPRKLRQECWSYLSLFDS 283
L+VP RK++ CW+ L+ DS
Sbjct: 120 LYVPNRKVKSLCWASLNQLDS 140
>BC052943-1|AAH52943.1| 396|Homo sapiens WD repeat domain 21B
protein.
Length = 396
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 221 LFVPPRKLRQECWSYLSLFDS 283
L+VP RK++ CW+ L+ DS
Sbjct: 120 LYVPNRKVKSLCWASLNQLDS 140
>BC035027-1|AAH35027.1| 376|Homo sapiens WDR21B protein protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 221 LFVPPRKLRQECWSYLSLFDS 283
L+VP RK++ CW+ L+ DS
Sbjct: 100 LYVPNRKVKSLCWASLNQLDS 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,401,770
Number of Sequences: 237096
Number of extensions: 792053
Number of successful extensions: 1627
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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