Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0566
         (321 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.17 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   2.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   4.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   4.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   6.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   8.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   8.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   8.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 258 QHSCRSFRGGTNKNSRCRYGY*KDRCTADS 169
           Q  C  + G    N+ C Y   KD C  DS
Sbjct: 320 QVECYKYYGNIMVNAMCAYAKGKDACQMDS 349


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 261 ATFPYLTASKSVCKKEKK 314
           A  P + ++ S CKK+KK
Sbjct: 568 ARTPSVMSASSTCKKDKK 585


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 50  LVSLLCIIMAKLSFLGARFASCAIREGQ*TSELLGVF 160
           +VSLLC+I   L         C+ + G   S+L  ++
Sbjct: 5   IVSLLCVIYCALVHADTVAILCSQKAGFDLSDLKSMY 41


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 50  LVSLLCIIMAKLSFLGARFASCAIREGQ*TSELLGVF 160
           +VSLLC+I   L         C+ + G   S+L  ++
Sbjct: 5   IVSLLCVIYCALVHADTVAILCSQKAGFDLSDLKSMY 41


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 231 GTNKNSRCRYGY*KDRCTAD 172
           G  K   C Y Y  ++C A+
Sbjct: 117 GIAKGDNCEYAYRFNKCYAE 136


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 157 HAQQFTGSLSFTNSARSKTGT 95
           H  +FT    FT+   SKT T
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNT 225


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 157 HAQQFTGSLSFTNSARSKTGT 95
           H  +FT    FT+   SKT T
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNT 225


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 188 IVAQRIHVRRTRPTIHWF 135
           I+    H   T PTI WF
Sbjct: 320 ILGLLFHALITLPTIFWF 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,158
Number of Sequences: 438
Number of extensions: 1835
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)