Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0565
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.0  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.0  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.2  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 121 FTWSLRDIMSATGTVVPSWAPDCSA 47
           F+W +RD +   G    S AP  SA
Sbjct: 132 FSWEIRDRLVKEGICDRSTAPSVSA 156


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 59  WSPTGNYSTRCAHDIPQAPGKPEENA 136
           WSP G+   +  H I   P  P + +
Sbjct: 87  WSPAGHEEAQSPHRIYMHPESPSKGS 112


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 53  TVWSPTGNYSTRCAH 97
           +V+ P G Y T+ AH
Sbjct: 103 SVYDPKGEYQTQYAH 117


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 53  TVWSPTGNYSTRCAH 97
           +V+ P G Y T+ AH
Sbjct: 103 SVYDPKGEYQTQYAH 117


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 61  PDCSAGNA 38
           PDCS GNA
Sbjct: 95  PDCSKGNA 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,984
Number of Sequences: 336
Number of extensions: 1846
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)