Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0565
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798     30   1.0  
04_04_0461 + 25390552-25391904                                         29   1.8  
02_04_0632 + 24614659-24615528,24615636-24616133                       29   3.2  
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911...    29   3.2  
12_01_0495 - 3935395-3937110                                           27   9.7  
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076...    27   9.7  

>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
          Length = 268

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 252 DADTGVASVTFSASGFTFLSSVLVSTAEVVF 160
           DAD GVA+V  +  G  F S V ++ AE VF
Sbjct: 53  DADDGVAAVVLAGRGRAFCSGVDLTAAEEVF 83


>04_04_0461 + 25390552-25391904
          Length = 450

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 142 CCCVFFRFTWSLRDIMSATGT 80
           CC VFF   WS+R++  A+ T
Sbjct: 333 CCAVFFPIIWSIRNLREASKT 353


>02_04_0632 + 24614659-24615528,24615636-24616133
          Length = 455

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 142 CCCVFFRFTWSLRDIMSATGT 80
           CC VFF   WS+R +  A+ T
Sbjct: 339 CCAVFFPIIWSIRSMREASKT 359


>01_06_1171 -
           35089719-35090336,35090596-35090715,35090851-35091108,
           35091934-35092563
          Length = 541

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -1

Query: 510 GSMCVGASVDLASSDFGVVASSFLASVEELVSLFLAASVWCSGTILVGSETG 355
           G  CVG + +   S+  V A++      E   L   ++VWC G +L+   TG
Sbjct: 319 GYGCVGFNTEEEISNASVAAANLSVETLEKGVLTPKSNVWCFGVVLLELITG 370


>12_01_0495 - 3935395-3937110
          Length = 571

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 529 CSCLYSWFYVC 497
           C+C+Y WF++C
Sbjct: 88  CNCVYKWFFLC 98


>09_06_0309 -
           22206812-22206884,22207008-22207103,22207531-22207619,
           22207738-22207820,22207932-22208048,22208132-22208319,
           22208430-22208500,22208570-22208782,22210022-22210081,
           22210186-22210476,22210590-22211894
          Length = 861

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 412 FFSSFCLVFWYNFSW 368
           FFS+F L+FW  +SW
Sbjct: 581 FFSTFLLLFWTIYSW 595


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,352,982
Number of Sequences: 37544
Number of extensions: 201594
Number of successful extensions: 684
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)