Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0564
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z49913-4|CAA90147.1|  498|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical
           protein T26G10.1 protein.
          Length = 489

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 70  TEIFSVDFLKNPEKLRLAALFHFPTFVHFHRY*TINKLKHYYIFIPEE 213
           T +FS    K   KL  A+L          RY T++ LK +YIF+P +
Sbjct: 221 TYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNK 268


>Z49913-4|CAA90147.1|  498|Caenorhabditis elegans Hypothetical
           protein ZK938.5 protein.
          Length = 498

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 223 RQNKRNHTTSFLAFPPKSPLSSIITLNS 306
           R+N+RN T   LAF P+ P   ++ L S
Sbjct: 269 RKNRRNFTIDQLAFEPEKPSLGLVDLVS 296


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 305 RRFWSFMFTTCVRKTNLTILTEG*NNTKRPNLFSIG 412
           RRFW F +    R     ++      TKR NL+ +G
Sbjct: 380 RRFWKFSWEEMARYDLPAMINYALKTTKRQNLYYVG 415


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,966,917
Number of Sequences: 27780
Number of extensions: 213411
Number of successful extensions: 463
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)