Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0563
         (477 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0558 - 22139878-22139895,22141073-22142404,22143355-221438...    28   4.5  
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57...    27   5.9  
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551           27   7.8  
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660           27   7.8  
09_04_0743 - 19862847-19864745,19865875-19866912                       27   7.8  

>06_03_0558 -
           22139878-22139895,22141073-22142404,22143355-22143804,
           22144247-22144315
          Length = 622

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -2

Query: 365 TPIGAANCLYLDA---LCWKIVQVHCFHHNHHQQVCLKTFFIY 246
           T   +  C Y DA   +C      HC HH HHQQ  L   + Y
Sbjct: 333 TTFSSVECGYCDAAATVCDHHHHHHC-HHRHHQQQLLAIGYSY 374


>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
            579266-579370,579975-580028,580244-580344,580454-581423,
            582030-582203,582341-582643,582719-582856,582993-583247,
            584230-584370,585008-585289,585395-585540,585627-585690,
            585723-585799,586285-586301,587728-587867,587972-588029,
            588121-588218,588727-588776,589260-589743
          Length = 2630

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 329  ALCWKIVQVHCFHHNHHQQVCL 264
            ALCW++  +H F  +H + + L
Sbjct: 1218 ALCWRVASIHNFKVDHKESLAL 1239


>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
          Length = 475

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 299 CFHHNHHQQVCLKTFFIYLIIY 234
           CFHHN H   C  +   Y+I++
Sbjct: 152 CFHHNGHGDPCRSSSNPYMILF 173


>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
          Length = 475

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 299 CFHHNHHQQVCLKTFFIYLIIY 234
           CFHHN H   C  +   Y+I++
Sbjct: 152 CFHHNGHGDPCRSSSNPYMILF 173


>09_04_0743 - 19862847-19864745,19865875-19866912
          Length = 978

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/55 (21%), Positives = 29/55 (52%)
 Frame = -1

Query: 336 SRRTMLENCTSALFPPQSPPTSLFKDIFYIPDYLFTMNDLSHVRSIRTKVNARSM 172
           S+  +  N  + L P       L+  +  +PD++ ++NDL+ V+ + T++  + +
Sbjct: 786 SKSLLFLNDLNGLAPKHLLSLRLYGHLEKLPDWVSSLNDLAKVKLLETQLEQKDI 840


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,709,310
Number of Sequences: 37544
Number of extensions: 207850
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)