Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0563
         (477 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.42 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = -1

Query: 339 VSRRTMLENCTSALFPPQSPPTSLFKDIFYIPDYLFT--MNDLSHVRSIRTKVNARSMLT 166
           +SRR +LE       PP  P      D+F  PD +F+  +    + + +  K+     L 
Sbjct: 32  ISRRHLLELAEKIPGPPALPLIGNALDLFGSPDAMFSQVLKKAENFKDV-VKIWVGPKLV 90

Query: 165 ISKYQHRFLLSLLSPAIYV 109
           I     R +  +LS  +Y+
Sbjct: 91  ICLIDPRDVEIILSSNVYI 109


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 337 ISTHYVGKLYKCIVST 290
           IS+++VGK+Y  ++ T
Sbjct: 106 ISSYFVGKMYFNLIDT 121


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 337 ISTHYVGKLYKCIVST 290
           IS+++VGK+Y  ++ T
Sbjct: 111 ISSYFVGKMYFNLIDT 126


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 337 ISTHYVGKLYKCIVST 290
           IS+++VGK+Y  ++ T
Sbjct: 111 ISSYFVGKMYFNLIDT 126


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 1   LQEFGTRLNTQINDILNNLY 60
           ++E        IND+LN LY
Sbjct: 64  VKELANSAKRDINDVLNVLY 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,405
Number of Sequences: 438
Number of extensions: 2585
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)