Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0562
         (646 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      88   5e-18
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      81   1e-15
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      69   3e-12
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.80 
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)                 29   3.2  
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)           29   3.2  
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)                       29   3.2  
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.3  
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)         28   7.5  
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)           27   9.9  
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_4113| Best HMM Match : Homeobox (HMM E-Value=1.7e-05)               27   9.9  
SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
 Frame = +1

Query: 181 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 360
           S  S++  LA   L + G T  ++ K   FP D   +     ++ +  +  G ++ MAN+
Sbjct: 33  SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92

Query: 361 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 537
           ++   G ++ E F   S++ F++++  +D+ KN+  A+ ++N WVE+ T ++IK+L+   
Sbjct: 93  LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152

Query: 538 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 639
             +  T   LVNA+YFKG+W   F+   T    F
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKF 186


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
 Frame = +1

Query: 205 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 372
           L  + L S G T  ++    G+ + +   T    K      L S  G  E+++ NK++ H
Sbjct: 5   LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64

Query: 373 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 549
           D  ++ E F   +R+ ++S++  +DF +K   A K +N WV + T   IK+L+    ++S
Sbjct: 65  DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124

Query: 550 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 645
            T  ++VNA+YFKG W  +F E  T    F+V
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFV 156


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +1

Query: 340 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 516
           E+ +AN +++     + + F  + +  +++D+  +D+  +   A K +N WVEE T  +I
Sbjct: 49  EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108

Query: 517 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 639
            DL+ P   +  T   LVNAIYFKG W   F +  +   +F
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEF 149


>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6489

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 3/199 (1%)
 Frame = -3

Query: 635  SRSLVSRSSNLELHAPLK*MALTRTAAVAELSESGLTKSLMRLLVFSSTQSLIDLAATVF 456
            S S+V   +   +  PLK   +  TAA    + + +  ++        T +    AAT  
Sbjct: 1089 SSSMVQAKAASSITTPLKTTVVAVTAAATTTAATTIAAAVTASTASVVTTTATVAAATTT 1148

Query: 455  FEKSMFWTSELKTSLETTAKXXXXXXXX*TYTLFAILSSTPLIDRRSRLLLANSVRIASS 276
             EK+   T+ +  +  T A          T T  A +++      ++  L A  V  A++
Sbjct: 1149 AEKATTTTAAMVKATTTAAAVTASTASVVTKT--ATVAAATTTAEKATTLTAAMVE-ATT 1205

Query: 275  SGKPIAFKSSSWVSPSEAKAN*ARGG---STENAERTTLFPGLFFTTSVNILAVKLSFPF 105
            +   +   ++S V+ +  KA         +T      T       TT+  I +  ++ P 
Sbjct: 1206 TAAAVTASTASVVTTTAEKATTTTAAMVEATTTEAAVTASTASVVTTTATIASSTITTPS 1265

Query: 104  LSTLERFVTAAIAAMAIVN 48
            LS +     +++   A  N
Sbjct: 1266 LSAISTTTASSVQVSAATN 1284


>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
          Length = 595

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = +1

Query: 7   GETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSA 186
           GE+  T    + C       +MAAV   + +L+  +      + + ++KNN  +S+   A
Sbjct: 17  GESNWTRCSPV-CKCAHIDKSMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGA 75

Query: 187 FSVLPPLAQLALASDG 234
           F+ L  L  L L+S+G
Sbjct: 76  FNGLDKLLTLDLSSNG 91


>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
          Length = 257

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 392 RILQSFPGTSSIRTSKTLISRRIQSQLS 475
           R+  SFPG S      TL++R  QSQ+S
Sbjct: 65  RLYDSFPGASRSEAESTLLARMRQSQVS 92


>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
          Length = 641

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 382 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 522
           K +E+  + S  +F+ + +N+DFS +     ++ DW   VE    N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507


>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 640

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 75  CHCRDGDSKQTNDCL 31
           CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350


>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
          Length = 672

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
           HQ L + E + ++PK PR  +F L
Sbjct: 56  HQNLSINEMDSSSPKRPRQHQFGL 79


>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
           HQ L + E + ++PK PR  +F L
Sbjct: 50  HQNLSINEMDSSSPKRPRQHQFGL 73


>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRFSL 161
           HQ L + E + ++PK PR  +F L
Sbjct: 7   HQNLSINEMDSSSPKCPRQHQFGL 30


>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
          Length = 1541

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 375  WWKTRREFCSRFQGRLQFGRPK 440
            W + RRE+C++ Q R ++ +P+
Sbjct: 1275 WLRWRREYCTQLQSRQKWNKPQ 1296


>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 314

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 373 DGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDS 540
           D   + +N  ++  +  NSD  N   + NT    +I+D    + NN I D  N D+
Sbjct: 211 DNNNISDNNNIIDNN--NSDNNNTSDNNNTSDNNNISDNNNTSDNNNISDNNNSDN 264


>SB_4113| Best HMM Match : Homeobox (HMM E-Value=1.7e-05)
          Length = 224

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +1

Query: 274 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 453
           D   +R+    K    R I+G   +M +K+      KLD  F  +  D   +  ++   +
Sbjct: 30  DSGLVRSPAVIKPHRKRRIRGTAKRMRSKLSKRQVNKLDAAF--MENDFPTTIARHKLAA 87

Query: 454 KNTVAAKSINDWVEEN-TNNR--IKDLVNPDSLSSATAAV 564
           +     K I  W+++N   NR  ++DL  P +  SA  ++
Sbjct: 88  EIKAPVKRIKSWLKQNRAKNRAQLRDLA-PSASESAAISI 126


>SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 232 HQKLKLTEREEAAPKMPRGQRF 167
           H+ L + ER+ ++PK PR  +F
Sbjct: 21  HENLSINERDSSSPKRPRQHQF 42


>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 148 VKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAI 288
           ++  P  S VLS  S  PPL  +    +  T   + + I  PD++A+
Sbjct: 221 IELGPQSSGVLSLTSDPPPLEAMGKEGEAHTDSGVEEEIDIPDEEAV 267


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,530,813
Number of Sequences: 59808
Number of extensions: 368630
Number of successful extensions: 1246
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)