Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0561
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.56 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.0  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.2  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 81  NLLKQIKKCGH*ISRYLNWKY*YNAVVKRCLQMIYLNNRVKFL 209
           NL++ +K C    +R   W   +  +   C  +IY+++ VK L
Sbjct: 140 NLIR-LKNCVIYFNRIFGWNILFGHIFTVCRTLIYIDDNVKGL 181


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 68  SHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEA 166
           S GT S E D E+    +P P    LVQ  G +
Sbjct: 74  SDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSS 106


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 297 AITPGILKASSVSKSLIILPGVVSAVTNAPKTSLDCLGKSFA 172
           AITPG  K  +     I   GVV+ +T     S+    K +A
Sbjct: 17  AITPGFRKNRTTCPEKIYAYGVVAFITLGVAVSVFYRAKDYA 58


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 297 AITPGILKASSVSKSLIILPGVVSAVTNAPKTSLDCLGKSFA 172
           AITPG  K  +     I   GVV+ +T     S+    K +A
Sbjct: 17  AITPGFRKNRTTCPEKIYAYGVVAFITLGVAVSVFYRAKDYA 58


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 21/77 (27%), Positives = 34/77 (44%)
 Frame = +2

Query: 317 IPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKIKYDFVN 496
           +PG  + VP S P  I  E          +    +I  A + K  NK+ G  +I  + ++
Sbjct: 96  VPGGKAEVPPSNPIYIHPES----PNFGAHWMKESISFA-KVKLTNKSNGNGQIMLNSLH 150

Query: 497 KEKPLLTIDEVLNSPKR 547
           K KP + +  V   P+R
Sbjct: 151 KYKPTVHLVRVGTEPRR 167


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 467 LVKIKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGS 598
           L  +K   +N    + + ++ +  PKRKT   ++ +  PT S S
Sbjct: 80  LPALKSRKLNNNNVVSSTNQEIRGPKRKTWKVEEDSPSPTSSVS 123



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 313 FGCVKSNNSRYFESFFGIKILNNTSGRCVCCNECTKNFTR 194
           F C   N S  ++         +T  +   C EC K FTR
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTR 174


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 223 CNECTKNFTR 194
           C EC K FTR
Sbjct: 12  CQECHKRFTR 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,901
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)