Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0561
(673 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 91 6e-19
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 89 4e-18
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 88 5e-18
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 81 8e-16
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 80 1e-15
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 75 4e-14
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 70 1e-12
01_03_0019 + 11696607-11696953,11697078-11697321 31 0.84
03_02_0339 - 7623897-7625837 31 1.1
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 91.5 bits (217), Expect = 6e-19
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Frame = +2
Query: 59 RSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTP 238
R + Q E ++ P+ P K+ +Q SGEA++ +D+P + GAFV + T P
Sbjct: 633 RILESSKQVIEISEDYLPVGLPAKKVGAELQASGEAIYVDDIPSPKDCLHGAFVYS-TKP 691
Query: 239 GSIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPA 418
+ +K + + + +A TAK+IP S V + F E L + ++ G+P
Sbjct: 692 LAHVKSIELNPSLEQLKTVAIVTAKDIPKGGSNVGANTIFG--PEPLFGDPLTQWAGEPL 749
Query: 419 AIIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGS 598
I+VA+ +KTAN AA + Y N + P+L+I+E + S ++ + + D
Sbjct: 750 GIVVAETQKTANIAASRALVDYSMENLDAPILSIEEAVRSSSYFEILPFLLPQKIGDFSK 809
Query: 599 DI----STVIEGSMKIHAQYHYTMETQTS 673
+ + + +H+QY++ METQT+
Sbjct: 810 GMEEADQKIYSTEVNLHSQYYFYMETQTA 838
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 88.6 bits (210), Expect = 4e-18
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Frame = +2
Query: 101 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 280
E P+ +P+ K+ +Q SGEAV+ +D+P ++GAF+ + T P + IK + +
Sbjct: 584 EYKPVGKPIKKVGAELQASGEAVYVDDIPAPKDCLYGAFIYS-THPHAHIKGVNFRSSLA 642
Query: 281 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 460
VI TAK+IP V P + +E L + ++ GQ +++A+ +K A A
Sbjct: 643 SQKVITVITAKDIPTGGENVGSCFPM-LGDEALFADPVAEFAGQNIGVVIAETQKYAYMA 701
Query: 461 AGLVKIKYDFVNKEKPLLTIDEVL--NSPKRKTLVRQDMTVQPTDSGSDIS--TVIEGSM 628
A I+Y+ N + P+LT+++ + NS + Q + + + +I+G +
Sbjct: 702 ARQAVIEYNTENLQPPILTVEDAVQHNSYFQVPPFLQPKPIGDFNQAMSEADHKIIDGEV 761
Query: 629 KIHAQYHYTMETQTS 673
K+ +QY++ METQT+
Sbjct: 762 KLGSQYYFYMETQTA 776
>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 88.2 bits (209), Expect = 5e-18
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Frame = +2
Query: 101 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 280
E P+ +P+ K +Q SGEAV+ +D+P ++GAF+ + T P + IKD + +
Sbjct: 591 EYKPVGKPIEKTGAELQASGEAVYVDDIPAPKDCLYGAFIYS-THPHAHIKDINFRSSLA 649
Query: 281 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 460
VI TAK+IP + P + +E L ++ GQ +++A+ +K A A
Sbjct: 650 SQKVITVITAKDIPTGGENIGSCFPM-LGDEALFVHPVSEFAGQNIGVVIAETQKYAYMA 708
Query: 461 AGLVKIKYDFVNKEKPLLTIDEVL--NS--PKRKTLVRQDMTVQPTDSGSDISTVIEGSM 628
A I+Y N + P+LTI++ + NS P L + +I+G +
Sbjct: 709 AKQAVIEYSTENLQPPILTIEDAVQHNSYFPVPPFLAPTPIGDFNQAMSEADHKIIDGEV 768
Query: 629 KIHAQYHYTMETQTS 673
K+ +QY++ METQT+
Sbjct: 769 KLESQYYFYMETQTA 783
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 81.0 bits (191), Expect = 8e-16
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 4/209 (1%)
Frame = +2
Query: 59 RSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTP 238
R V GTQ +E ++ + QPV ++Q +GEA + +D P + + A V + T
Sbjct: 602 RPVGVGTQCYELVRQGTAVGQPVVHTSAMLQVTGEAEYTDDTPTPPNTLHAALVLS-TKA 660
Query: 239 GSIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPA 418
+ I D A PG + +K++PG N P+ I +EE+ V GQ
Sbjct: 661 HARILSIDASLAKSSPGFAGLFLSKDVPGANHTGPV-----IHDEEVFASDVVTCVGQIV 715
Query: 419 AIIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVLNS----PKRKTLVRQDMTVQPT 586
++VAD A AA V I+Y ++ +L+I+E + + P K + + Q
Sbjct: 716 GLVVADTRDNAKAAANKVNIEY---SELPAILSIEEAVKAGSFHPNSKRCLVKGNVEQCF 772
Query: 587 DSGSDISTVIEGSMKIHAQYHYTMETQTS 673
SG+ +IEG +++ Q H+ ME Q++
Sbjct: 773 LSGA-CDRIIEGKVQVGGQEHFYMEPQST 800
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 80.2 bits (189), Expect = 1e-15
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Frame = +2
Query: 101 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 280
E P+ +P+ K +Q SGEAV+ +D+ ++GAF+ + T P + IK + +
Sbjct: 592 EYRPIGKPIEKTGAELQASGEAVYVDDISAPKDCLYGAFIYS-THPHAHIKGVNFRSSLA 650
Query: 281 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 460
VI T K+IP + P + +E L + ++ GQ +++A+ +K A A
Sbjct: 651 SQKVITVITLKDIPTNGKNIGSCSPM-LGDEALFVDPVSEFAGQNIGVVIAETQKYAYMA 709
Query: 461 AGLVKIKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSG------SDIS-TVIE 619
A I+Y N + P+LT+++ + + + + + PT G S+ +I+
Sbjct: 710 AKQSVIEYSTENLQPPILTVEDAV---QHNSYFQVPPFLAPTPIGEFNQAMSEADHKIID 766
Query: 620 GSMKIHAQYHYTMETQTS 673
G +K+ +QY++ METQT+
Sbjct: 767 GEVKLESQYYFYMETQTA 784
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 75.4 bits (177), Expect = 4e-14
Identities = 44/195 (22%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Frame = +2
Query: 101 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 280
E P+ P+ K +V +Q SGEA++ +D+P + ++G F+ + T P + +K + +
Sbjct: 589 EYKPVGDPIKKYKVELQASGEAIYVDDIPAPKNCLYGEFIYS-TQPLANVKSIKFKPSLA 647
Query: 281 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 460
++ +AK+IP + + F + E L + ++ GQ +++A+ ++ A+ A
Sbjct: 648 SKKILTVVSAKDIPTGGRNIGSTFLFG-DEEPLFGDPIAEFAGQALGVVIAETQRYADMA 706
Query: 461 AGLVKIKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQPTDSGSDIS----TVIEGSM 628
A ++Y + P+LT+++ + + + + Q D ++ ++ +
Sbjct: 707 AKQAVVEYTTDGLKAPILTVEQAVQNNSYFQVPPERAPKQVGDFSKGMAEADHKIMSEEV 766
Query: 629 KIHAQYHYTMETQTS 673
K+ +QY++ METQT+
Sbjct: 767 KLASQYYFYMETQTA 781
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/149 (25%), Positives = 78/149 (52%)
Frame = +2
Query: 92 TDKEVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEE 271
+D E P+ P+ K +V VQ SGEA++ +D+P + ++G F+ + T P + +K +
Sbjct: 471 SDDEYTPVGDPIKKYKVEVQASGEAIYVDDIPAPKNCLYGEFIYS-TQPLANVKSIKFKP 529
Query: 272 AFKIPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTA 451
+ +I +AK+IP + + F + E L + ++ GQ +++A+ + A
Sbjct: 530 SLASKKIITVVSAKDIPTGGRNIGSTFWFG-DEEPLFGDPIAEFAGQVLGVVIAETQPYA 588
Query: 452 NKAAGLVKIKYDFVNKEKPLLTIDEVLNS 538
+ AA ++Y + P+LT+++ + S
Sbjct: 589 DMAAKQAVVEYTTDGLKAPILTVEQAVQS 617
>01_03_0019 + 11696607-11696953,11697078-11697321
Length = 196
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 320 PGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKI 478
P + P + P A + E C+KT +YG + ADR ++ GL ++
Sbjct: 22 PAAEAGAPTAAPLANYSLEDACKKTGPHYGLCIVTLSADRSAKSSDTVGLARV 74
>03_02_0339 - 7623897-7625837
Length = 646
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 404 YGQPAAIIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVLNSPKRKTLVRQDMTVQ 580
Y +PAA I+AD + NKAAG+ + ++ + T++ V P +TL D ++
Sbjct: 55 YERPAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLP--RTLAMLDTALE 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,307,490
Number of Sequences: 37544
Number of extensions: 365666
Number of successful extensions: 970
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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