Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0560
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   0.37 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   2.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   4.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.9  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 116 VHTLDEPTGLQPPPYLDEQSRVDEPLTFDDLS--PLPPP 226
           + +L++   L         S +  P T DDLS  P PPP
Sbjct: 111 IRSLEDLLALDESTVSSSTSSIPSPSTTDDLSTNPTPPP 149


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
 Frame = +2

Query: 218 PPPIDFNAPGSVPSENPLGQEMPSHPT----QPPTKV 316
           PPP  +N P  +    P     P++ T    Q PT V
Sbjct: 280 PPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTV 316


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 215  LPPPIDFNAPGSVPSENP 268
            +PPP   + PGS  S++P
Sbjct: 1111 VPPPSGSSGPGSTGSKSP 1128


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = -1

Query: 263 FLKGRNLGR*SLWGVVTETSHRT*GAH--LLETVHQGM 156
           + K  NL    +W + T+  H T G    LL  V+  M
Sbjct: 337 YAKDNNLAGVMIWSIETDDLHATCGTKNALLHAVNDAM 374


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +2

Query: 188 PLTFDDL-SPLPPPIDFNAPGSVPSENPLGQEMPSHPT 298
           PL  D   SP P P    AP   P  +PL QE  S  T
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTT 108


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 50  DYEIEYKKGKLNCNADSLSR 109
           DY  EY+K  L  N D  SR
Sbjct: 76  DYSSEYEKCDLPFNIDCTSR 95


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = -2

Query: 433 VKFLNICVKRIFRL--SGHF 380
           +K+L  CVK + RL  S HF
Sbjct: 361 MKYLERCVKEVLRLYPSVHF 380


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = -2

Query: 433 VKFLNICVKRIFRL--SGHF 380
           +K+L  CVK + RL  S HF
Sbjct: 361 MKYLERCVKEVLRLYPSVHF 380


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 234 KSMGGGNGDKSSNVRGSSTRDCS 166
           KSM   +    SNV   S RDCS
Sbjct: 271 KSMLNSHMKSHSNVYRYSCRDCS 293


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 234 KSMGGGNGDKSSNVRGSSTRDCS 166
           KSM   +    SNV   S RDCS
Sbjct: 29  KSMLNSHMKSHSNVYRYSCRDCS 51


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 262 KPSWTRNA 285
           KP WTRNA
Sbjct: 283 KPIWTRNA 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,063
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)