Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0560
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.036
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.036
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 29 1.4
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 1.8
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 29 1.8
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 29 1.8
AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormo... 29 1.8
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical pr... 29 2.4
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 29 2.4
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 29 2.4
AC024811-3|AAF60778.1| 209|Caenorhabditis elegans Hypothetical ... 29 2.4
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 3.2
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 3.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 28 4.2
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 4.2
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 4.2
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 27 5.5
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 5.5
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81475-4|CAB03911.1| 323|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81032-3|CAB02720.1| 204|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 27 7.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 7.3
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 7.3
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 27 9.7
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 27 9.7
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 27 9.7
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 27 9.7
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 27 9.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.036
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +2
Query: 137 TGLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAP--GSVPSENPLGQEMPSHPTQPP 307
+G+ PPP R P + P PPP F P G +P P G P PP
Sbjct: 293 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.036
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +2
Query: 137 TGLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAP--GSVPSENPLGQEMPSHPTQPP 307
+G+ PPP R P + P PPP F P G +P P G P PP
Sbjct: 303 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAP--GSVPSENPLGQEMPSHPTQPPTKV 316
PPP + S D+ DDL P PPP+ N +P+E P + PPT +
Sbjct: 303 PPPDMSILSIDDDD---DDLPPPPPPLLMNTSIVHQLPAEAPSTIQFVEPSAAPPTNI 357
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 294 GWLGISCPRGFSEGTEPGALKSMGGGNGDKSSNV--RGSSTRDC-SSRYGGG 148
G CP+G S G + G GGG G N RG +RDC S+R GG
Sbjct: 44 GHFSRDCPKGGSGGGQRG-----GGGGGGSCYNCGGRGHYSRDCPSARSEGG 90
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 294 GWLGISCPRGFSEGTEPGALKSMGGGNGDKSSNVRGSSTRDCSSRYGGG 148
G + +CP G S+G G GGG+ + G +RDC GG
Sbjct: 13 GHISRNCPNGESDGGRRGG----GGGSTCYNCQETGHFSRDCPKGGSGG 57
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 374 YLKVSRQSKDPFNTNIQEFNDSLLKAKCK 460
+L++ + +P N +++F D L+KA CK
Sbjct: 98 FLRIRYKGDNPLNRELKDFYDILVKAMCK 126
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 374 YLKVSRQSKDPFNTNIQEFNDSLLKAKCK 460
+L++ + +P N +++F D L+KA CK
Sbjct: 98 FLRIRYKGDNPLNRELKDFYDILVKAMCK 126
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 374 YLKVSRQSKDPFNTNIQEFNDSLLKAKCK 460
+L++ + +P N +++F D L+KA CK
Sbjct: 98 FLRIRYKGDNPLNRELKDFYDILVKAMCK 126
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Frame = +2
Query: 212 PLPPPIDFN----APGSVPSENPLGQEMPSHPT--QPP 307
P PPPIDF+ AP ++ E+ L P PT QPP
Sbjct: 12 PPPPPIDFSRSLIAPTAIKQESHLIPSTPGTPTAFQPP 49
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 83 NCNADSLSRNLVHT--LDEPTGLQPPPYLDEQSRVDEPLTFDDLS 211
NC +D S LVH+ +D+ G + P LDE +PL DL+
Sbjct: 187 NCESDMFSM-LVHSCFVDDGNGDERKPLLDEHGCAIDPLILPDLT 230
>AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 41 protein.
Length = 160
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Frame = +2
Query: 212 PLPPPIDFN----APGSVPSENPLGQEMPSHPT--QPP 307
P PPPIDF+ AP ++ E+ L P PT QPP
Sbjct: 54 PPPPPIDFSRSLIAPTAIKQESHLIPSTPGTPTAFQPP 91
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 167 EQSRVDEPL-TFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
EQ VD+ + T +S PP +D NAPG++ S ++PS T+ P
Sbjct: 121 EQILVDDTMMTVSCMSHYPPQMDDNAPGAIGS----AVDIPSCSTENP 164
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 167 EQSRVDEPL-TFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
EQ VD+ + T +S PP +D NAPG++ S ++PS T+ P
Sbjct: 129 EQILVDDTMMTVSCMSHYPPQMDDNAPGAIGS----AVDIPSCSTENP 172
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +2
Query: 134 PTGLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPPTK 313
P G+ PPP + P + P PPP+ F AP P + LG + P +P T
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPP-PPPM-FGAPPPPPPPSGLG--VAPQPPRPKTP 135
Query: 314 V 316
V
Sbjct: 136 V 136
>U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical
protein F31A3.5 protein.
Length = 711
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 101 LSRNLVHTLDEPTGLQPPPYLDEQSRVDEPL--TFDDLSPLPPPIDFNAPGSVPSENP 268
+ RN+ H D+ QP P S EP+ T+ + P+PPP+ F+ +V S P
Sbjct: 306 IRRNVSHYGDDS---QPGP-----SNRPEPILPTYPIVDPIPPPVPFDEQSAVSSREP 355
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 167 EQSRVDEPL-TFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
EQ VD+ + T +S PP +D NAPG++ S ++PS T+ P
Sbjct: 121 EQILVDDTMMTVSCMSHYPPQMDDNAPGAIGS----AVDIPSCSTENP 164
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 167 EQSRVDEPL-TFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
EQ VD+ + T +S PP +D NAPG++ S ++PS T+ P
Sbjct: 129 EQILVDDTMMTVSCMSHYPPQMDDNAPGAIGS----AVDIPSCSTENP 172
>AC024811-3|AAF60778.1| 209|Caenorhabditis elegans Hypothetical
protein Y54E10BL.3 protein.
Length = 209
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 249 EPGALKSMGGGNGDKSSNVRGSSTRDCSSRYGGGCKPVG 133
EP A + GG NG+KS+ + + G CK +G
Sbjct: 164 EPEAGQKCGGKNGEKSTKYGAEESDSKNDTEGAECKEIG 202
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 185 EPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMP-SHPTQPP 307
+P+ F P+P P+ F P P P + MP S P P
Sbjct: 125 KPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEP 166
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 185 EPLTFDDLSPLPPPIDFNAPGSVPSENPL----GQEMPSHPTQP 304
+P+ F P P P+ + P S P NP+ + MP H +P
Sbjct: 79 KPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKP 122
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 185 EPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPPTK 313
+P+ F P P P+ + P S P NP+ P +P K
Sbjct: 143 KPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPK 185
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 89 NADSLSRNLVHTLDEPTGLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGS-----V 253
+ ++ + ++ T P P P D + D P + + +P P D AP S
Sbjct: 358 STEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSIPEETPAPAAEDTPAPASAAAEET 417
Query: 254 PSENPLGQEMPSHPT 298
P+ P +E P+ T
Sbjct: 418 PAPAPAAEETPAPET 432
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 188 PLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQP 304
P DDL+P+PPP P S+ P G +P P P
Sbjct: 1346 PPPSDDLTPVPPP---PPPPPTMSKAPTGVPLPVPPPPP 1381
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPID-FNAPGSVPSENPLGQEMPSHPTQPPT 310
PP + S +P P PPP+ P SVP P + + PPT
Sbjct: 469 PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGPPT 523
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPPT 310
PP L + SR+ PL D L +P N G V E P Q P + PT
Sbjct: 18 PPLGLLDPSRIQNPLANDQLHQVPQ--QQNPSGFVMPEQPRQQPPPQTWQRTPT 69
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPPT 310
PP L + SR+ PL D L +P N G V E P Q P + PT
Sbjct: 18 PPLGLLDPSRIQNPLANDQLHQVPQ--QQNPSGFVMPEQPRQQPPPQTWQRTPT 69
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.9 bits (59), Expect = 4.2
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +2
Query: 50 DYEIEYKKGKLNCNADSLSRNLVHTLDEPTGLQPPPYLDEQSR-VDEPLT-FDDLSPLPP 223
+ E E +K K + S VHT P + P L V++P+T SPLP
Sbjct: 477 EIEKEKEKDKDEDDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPS 536
Query: 224 PIDFNAPGSVPSENPLGQEMPSHPTQPP 307
P+ AP V QPP
Sbjct: 537 PVSSPAPQLVQKPTTPTDASKPFVAQPP 564
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 PTGLQPPP--YLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQ 301
P L PPP + +Q + P T +P+PPP N S P+G + P + Q
Sbjct: 255 PQHLIPPPNPFFPQQHQTWTPPTLLQPNPIPPPPQRN-ESSFDPYIPIGVQQPPYQFQ 311
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
PPP L + +P++ SPL P D ++P + + P+ E + P PP
Sbjct: 1328 PPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAF--QFPVVYEASTAPPLPP 1378
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 149 PPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
PPP L + +P++ SPL P D ++P + + P+ E + P PP
Sbjct: 1328 PPPKLHPRRMTQQPMSPLAKSPLTPSRDNSSPSAF--QFPVVYEASTAPPLPP 1378
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 140 GLQPPPYLDEQSRVDEPLTF-DDLSPLP-PPIDF-NAPGSVPSENPLGQ-EMPSHPTQPP 307
G+QP PY+ Q+ V + + P P P++F AP + + P Q P P QPP
Sbjct: 467 GMQPNPYVQPQAPVQQQIAQPPPQQPAPQQPMNFLPAPQAPIIQAPAPQAPAPMQPQQPP 526
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 27.5 bits (58), Expect = 5.5
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +2
Query: 2 LTRWRALN*WIPRAAGDYE-IEY-KKGKLNCNADSLSRNLVHTLDEPTGLQPPPYLDEQS 175
+++ R L+ P+ +GD E +E KK KL+ +A + S + + EP + P S
Sbjct: 34 MSKKRGLDQMEPQVSGDDESLEMAKKVKLD-SAQTSSFSSQSKMKEPEVPEREPSTPNNS 92
Query: 176 R------VDEPLTFDDLSPLPPPIDFNAPGSV 253
R +DE LT D+ +P P ID ++ S+
Sbjct: 93 RSNWRSDMDEELTDDEDTPTPEVIDVSSDESM 124
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 143 NRLVHREYERGCEIRNLRYNLTSPFCIQSRSRLQPGGSTSL 21
+ L+ R++ R LR S I RSR +PG +TSL
Sbjct: 468 SNLIPRQFVRSSNGNRLRARSQSAKSIAKRSRSRPGTTTSL 508
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 128 DEPTGLQPPPYLDEQSRVDE--PLTFDDLSPLPPPIDFNAPGSVP 256
D+ +P DE++ VD+ P+ + +PLPP AP VP
Sbjct: 500 DQEAHEEPEDESDERNPVDQEAPVPIEVDAPLPPASPIAAPAPVP 544
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 149 PPPYLDE--QSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
PPP ++ Q R+D L+ + +PP + + P P P ++P P P
Sbjct: 289 PPPGFNQNVQPRMDPSLSPGGMHGMPPSMGTSMPHMGPMMPPQNMQLPRLPPLNP 343
>Z81475-4|CAB03911.1| 323|Caenorhabditis elegans Hypothetical
protein C24H11.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 39 GLQATTRLNTKRGS*IVTQIPYLATSFILSMNQPVYNHPHTLMNSLE*MSPLRSMTCLR 215
G ++TTRL + I+ IPY+ FIL ++N + + L + S+ +R
Sbjct: 179 GFKSTTRLVYLINTTILMGIPYMMPVFILYWRHQIFNQINEVQTHLSERTKKSSLDLVR 237
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +2
Query: 146 QPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHP 295
+PPP E + DE P PPP P P P +E P P
Sbjct: 688 RPPPARPEAPKKDETAVDAAAPPRPPPAARPPP---PRPAPANKEKPKEP 734
>Z81032-3|CAB02720.1| 204|Caenorhabditis elegans Hypothetical
protein C02F4.4 protein.
Length = 204
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 131 EPTGLQPPPYLDEQSRV 181
EPTG++PPP L +SR+
Sbjct: 35 EPTGVEPPPNLQLRSRM 51
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 149 PPPYLDE--QSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQPP 307
PPP ++ Q R+D L+ + +PP + + P P P ++P P P
Sbjct: 289 PPPGFNQNVQPRMDPSLSPGGMHGMPPSMGTSMPHMGPMMPPQNMQLPRLPPLNP 343
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 261 SEGTEPGALKSMGG-GNGDKSSNVRGSSTRDCSSRYGGGCKPVGSSRV*TR 112
S+G G ++ G G G ++ GS D S G G GSS V T+
Sbjct: 1173 SDGVNSGKTTALNGDGTGSGTATTPGSHLGDGGSTSGSGSDSNGSSGVSTK 1223
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 261 SEGTEPGALKSMGG-GNGDKSSNVRGSSTRDCSSRYGGGCKPVGSSRV*TR 112
S+G G ++ G G G ++ GS D S G G GSS V T+
Sbjct: 1173 SDGVNSGKTTALNGDGTGSGTATTPGSHLGDGGSTSGSGSDSNGSSGVSTK 1223
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 246 PGALKSMGGGNGDKSSNVRGSSTRDCSSRYGGGCKPVGSS 127
P A+ +GGGN + ++ GS++ D Y P GS+
Sbjct: 599 PKAVAELGGGNSNDDDSMSGSNSADEREPYKLFVGPPGST 638
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 185 EPLTFDDLSPLPPPIDF--NAPGSVPSENPLGQEMPSHPT 298
EPL F + PPP+ F N G+ ++ E+P++ T
Sbjct: 81 EPLRFSPPNVTPPPLQFSTNTDGNRKNQRVRFNELPNYST 120
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = -1
Query: 239 R*SLWGVVTETSHRT*GAHLLET-------VHQGM-GVVVNRLVHREYERGCEIRNLRYN 84
R S+ VTET +R GA ++T V G G +LV+ ++G E+ +LRY+
Sbjct: 79 RNSVLQTVTETFNRY-GAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 137
Query: 83 LTSPF 69
LT PF
Sbjct: 138 LTVPF 142
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = -1
Query: 239 R*SLWGVVTETSHRT*GAHLLET-------VHQGM-GVVVNRLVHREYERGCEIRNLRYN 84
R S+ VTET +R GA ++T V G G +LV+ ++G E+ +LRY+
Sbjct: 78 RNSVLQTVTETFNRY-GAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 136
Query: 83 LTSPF 69
LT PF
Sbjct: 137 LTVPF 141
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 125 LDEPTGLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENPLGQEMPSHPTQP 304
+ + G + PP+ + +PL+F+ P PP + N + N G+++ S QP
Sbjct: 1 MGDQDGKKKPPF--DMPPPPKPLSFE--MPKPPVLQPNIASLLQKTNTTGEDVKSKDAQP 56
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 26.6 bits (56), Expect = 9.7
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 306 GG*VGWLGISCPRGFSEGTEPGALKSMGGGNGDKSSNVRGSSTRDCSSRYGG 151
GG G G G S G G S GG G S + R ST SS Y G
Sbjct: 47 GGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRG 98
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = -1
Query: 239 R*SLWGVVTETSHRT*GAHLLET-------VHQGM-GVVVNRLVHREYERGCEIRNLRYN 84
R S+ VTET +R GA ++T V G G +LV+ ++G E+ +LRY+
Sbjct: 28 RNSVLQTVTETFNRY-GAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 86
Query: 83 LTSPF 69
LT PF
Sbjct: 87 LTVPF 91
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = -1
Query: 239 R*SLWGVVTETSHRT*GAHLLET-------VHQGM-GVVVNRLVHREYERGCEIRNLRYN 84
R S+ VTET +R GA ++T V G G +LV+ ++G E+ +LRY+
Sbjct: 39 RNSVLQTVTETFNRY-GAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYD 97
Query: 83 LTSPF 69
LT PF
Sbjct: 98 LTVPF 102
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 EPLTFDDLSPLP--PPIDFNAPGSVPSENPLGQEMPSHPTQP 304
EPLT P P PP PG ++ PLG P P P
Sbjct: 130 EPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGP 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,078,853
Number of Sequences: 27780
Number of extensions: 245318
Number of successful extensions: 1066
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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