Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0560
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.00 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 209 SPLPP-PIDFNAPGSVPSENPLGQEMPSHPTQP 304
           +P+PP P   N  G  P  N  G  MP+ PT P
Sbjct: 415 APMPPIPNMSNMSGMPPLPNMPGS-MPTMPTMP 446



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 140 GLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSENP 268
           G QP P+   Q+    P      +P   P     PG+ PS+NP
Sbjct: 22  GPQPSPHQSPQA----PQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 VDEPLTFDDLSPLPPPIDFNAPGSVPSENP 268
           + EP+   + SP P P   +AP S  S +P
Sbjct: 500 IHEPVVETNSSPSPNPRIASAPSSSTSSSP 529


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 83  NCNADSLSRNLVHTLDEPTGLQPPPYLDEQSRVDEPLTFDDLS 211
           NC  D+ S      +  PT  +   ++ E+ R+  P+TF D++
Sbjct: 644 NC-LDASSSRRGSKIGSPTPAEST-FIPEERRIYSPITFQDVA 684


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +2

Query: 212 PLPPPIDFNAPGSVPSENPLGQEMPSHPT--QPPTK 313
           P+  P   N    VPS +PL   +P   T   PP K
Sbjct: 433 PILTPPSSNPVSPVPSPDPLDLAIPVRETLILPPRK 468


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 185 EPLTFDDLSPLPPP 226
           E +TFD   PLPPP
Sbjct: 365 EFVTFDLDEPLPPP 378


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 4   HAVARSKLVDPPGCRRLR 57
           H  + SK   PP C R R
Sbjct: 555 HRASLSKTPQPPQCPRFR 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,905
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)