Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0558
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.35 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   0.61 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   2.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   9.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   9.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   9.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   9.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 275 PKDNSNTTNAMLFINSVMSNRLKNVIYIAQSLAVVVRDIFVYLFVTVCIQSVY 433
           PKDN     A+L I   + N L N+  +A S+      +FV    ++CI   Y
Sbjct: 202 PKDNHFL--ALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFY 252


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 342 LSLLDITLFMNNIAFVVFEL 283
           LS + +T F+NN  F++F++
Sbjct: 285 LSYIILTSFLNNFYFIIFQV 304



 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 106 WRSLRTGWKR*RVI 65
           +RSLR  WK  RV+
Sbjct: 43  FRSLRFSWKSARVV 56


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 32  PETAAGDGEPVDDPSPFPSRAQRTPRNSRTSLKTLLLVHKY 154
           P+T+A  G P+   +    +  R PR   T+ + L L  K+
Sbjct: 94  PQTSAPTGPPIVRCALRKHKPNRKPRTPFTTQQLLALEKKF 134


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 297 VVFELSLGGNHMIFVTEYIN-IGKNKFVVFVKGL 199
           ++F +SL GN  +F+   I+ + K  F  FV  +
Sbjct: 82  LIFVVSLSGNSAVFIMLIISFMHKKSFKNFVNNV 115



 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 351 ITFLSLLDITLFMNNIAFVVFELSLGGNHMIFVTEY 244
           I+F+       F+NN+A +   L+  G ++ + T+Y
Sbjct: 100 ISFMHKKSFKNFVNNVAALDETLAKLGQYINYETDY 135


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 227 INLLYLSKG*NYSIFATKMTLIPCRICVLRVRFSMKF 117
           INLL   +  N   FA KM  + C I  L + F+  F
Sbjct: 176 INLLLTEQLQNRRFFAKKMEGLVCSIKELNMIFNEFF 212


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = -3

Query: 112 IPWRSLRTGWKR*RVIDRFSIACCCLRTEYCLVPNSC 2
           I W    T     R    +   C      YC +PNSC
Sbjct: 453 IQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSC 489


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = -3

Query: 112 IPWRSLRTGWKR*RVIDRFSIACCCLRTEYCLVPNSC 2
           I W    T     R    +   C      YC +PNSC
Sbjct: 460 IQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSC 496


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +3

Query: 144 YTNTTWY*CHFCC 182
           Y    +Y CH CC
Sbjct: 642 YAADVFYICHVCC 654


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 46  CCCLRT 29
           CCCLRT
Sbjct: 190 CCCLRT 195


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 172 IFVANIL*F*PFDKYNKFIFTNI 240
           +FVA+   F  +  Y  +IF NI
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANI 139


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 172 IFVANIL*F*PFDKYNKFIFTNI 240
           +FVA+   F  +  Y  +IF NI
Sbjct: 117 LFVASNCFFWSYQSYMSYIFANI 139


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 197 FNPLTNTTNLFLPIF 241
           + P+TN TNL  P +
Sbjct: 350 YQPVTNLTNLTYPSY 364


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 69  SSTGSPSPAAVSGPNIASCRIPA 1
           ++T S SPA+V+    A   IPA
Sbjct: 37  ATTSSGSPASVASNASAPLHIPA 59


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 83  PSRAQRTPRNSRTSLKTLLLVHKYDMVLMSFLLQIYYSFNPLTNTTNLFL 232
           P R++  P + R  L  L +     M+L        Y    +  TTN+ +
Sbjct: 307 PDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 356


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 171 DINTMSYLCTKSKVFN 124
           DIN++ Y C  ++  N
Sbjct: 378 DINSIQYFCLMARCLN 393


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 83  PSRAQRTPRNSRTSLKTLLLVHKYDMVLMSFLLQIYYSFNPLTNTTNLFL 232
           P R++  P + R  L  L +     M+L        Y    +  TTN+ +
Sbjct: 32  PDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIII 81


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 106 WRSLRTGWKR*RVI 65
           +RSLR  WK  RV+
Sbjct: 43  FRSLRFSWKSARVV 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,737
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)