Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0556
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 190 7e-49
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 190 7e-49
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 187 7e-48
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 187 7e-48
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 171 5e-43
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 31 0.91
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 31 0.91
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 28 4.9
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 28 4.9
AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical ... 28 4.9
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 190 bits (463), Expect = 7e-49
Identities = 84/140 (60%), Positives = 96/140 (68%)
Frame = +2
Query: 215 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 394
P K +IV NV F+ LH A GLY AK T +F +L+ G FGITAGAHRLWS
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 395 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 574
H YK P+ I LM+ N+IA QN + W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161
Query: 575 LLVRKHPMVKIAGKSLDMSD 634
LLVRKHP VK G LDMSD
Sbjct: 162 LLVRKHPQVKEQGAKLDMSD 181
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 190 bits (463), Expect = 7e-49
Identities = 84/140 (60%), Positives = 96/140 (68%)
Frame = +2
Query: 215 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 394
P K +IV NV F+ LH A GLY AK T +F +L+ G FGITAGAHRLWS
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 395 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 574
H YK P+ I LM+ N+IA QN + W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 102 HKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGW 161
Query: 575 LLVRKHPMVKIAGKSLDMSD 634
LLVRKHP VK G LDMSD
Sbjct: 162 LLVRKHPQVKEQGAKLDMSD 181
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 187 bits (455), Expect = 7e-48
Identities = 84/140 (60%), Positives = 97/140 (69%)
Frame = +2
Query: 215 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 394
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 395 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 574
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 575 LLVRKHPMVKIAGKSLDMSD 634
LLVRKHP VK G LD+SD
Sbjct: 161 LLVRKHPQVKEHGGKLDLSD 180
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 187 bits (455), Expect = 7e-48
Identities = 84/140 (60%), Positives = 97/140 (69%)
Frame = +2
Query: 215 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 394
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 395 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 574
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 575 LLVRKHPMVKIAGKSLDMSD 634
LLVRKHP VK G LD+SD
Sbjct: 161 LLVRKHPQVKEHGGKLDLSD 180
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 171 bits (415), Expect = 5e-43
Identities = 78/139 (56%), Positives = 93/139 (66%)
Frame = +2
Query: 218 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 397
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 398 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 577
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 578 LVRKHPMVKIAGKSLDMSD 634
LV+KH +KI G LD+SD
Sbjct: 154 LVKKHDQLKIQGGKLDLSD 172
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 171 bits (415), Expect = 5e-43
Identities = 78/139 (56%), Positives = 93/139 (66%)
Frame = +2
Query: 218 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 397
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 398 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 577
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 578 LVRKHPMVKIAGKSLDMSD 634
LV+KH +KI G LD+SD
Sbjct: 154 LVKKHDQLKIQGGKLDLSD 172
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +2
Query: 146 QMKQNTSRDNHVDYEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATS 325
+ K+ +D + EKL+AP+ + + + +M R YLH+ Y C+++ +++ +
Sbjct: 55 ESKEYKRKDVVLYREKLLAPEVTNLVSREQMMMHPRDQYLHVLSPY----CYSAIEVSHA 110
Query: 326 VFAIVLFFL 352
VF+I + +
Sbjct: 111 VFSIFAYIV 119
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.91
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 258 AIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLV 365
++Y+L + D++S+ W+ +F++LC + G +V
Sbjct: 182 SVYLLSAFADYVSIIVLSFWIVQFVVLCVAIPGAIV 217
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 185 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 292
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 185 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 292
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical
protein Y9C9A.17 protein.
Length = 369
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 249 YVLAIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLVLQLELIV 386
+ LA ++ +Y+ I+ SPQ+ +++LL +S L + LEL+V
Sbjct: 20 FSLATNLIAIYL-VITKSPQKIGSYKYLLCSFSILSMIFALLELLV 64
>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 227 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 331
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 227 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 331
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 284 GLYLCFTSAKLATS-VFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 460
GL TS + S VF + L + LW++N + L +++ + NS+
Sbjct: 18 GLTNALTSITVKVSFVFLATVILLSYYFAVLAIRALWNNNIFSNSTRLILIVCLLNSVVH 77
Query: 461 QNTI 472
Q+T+
Sbjct: 78 QSTM 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,598,228
Number of Sequences: 27780
Number of extensions: 298290
Number of successful extensions: 737
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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