Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0554
(549 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46094| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 30 1.1
SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_19926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_55041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_14826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_7555| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_46094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 72 ETKIKLPTKNI*ILVPNSCSPGDP 1
ET KLP I NSCSPGDP
Sbjct: 48 ETLSKLPNNLFIITTSNSCSPGDP 71
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 171 IYILIVFLVFSVCEGSLGLSILVSIIRSHGNDYFQRF 281
I I+I+ ++ + E + LSI+++II +DY Q +
Sbjct: 462 IIIIIIIIIIIIIENVINLSIIINIIDVDVDDYLQAY 498
>SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = -1
Query: 93 TNKCLFLETKIKL-----PTKNI*ILVPNSCSPGDP 1
TNK FL K+K+ P ++ + NSCSPGDP
Sbjct: 11 TNKIYFLPAKLKVHLAPDPMQHAIPALSNSCSPGDP 46
>SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 57 LPTKNI*ILVPNSCSPGDP 1
L + NI L+ NSCSPGDP
Sbjct: 8 LISANIVFLISNSCSPGDP 26
>SB_7024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 99 RTTNKCLFLETKIKLPTKNI*I-LVPNSCSPGDP 1
+ +N C T L TKN + L NSCSPGDP
Sbjct: 11 KKSNTCNKNTTFSTLKTKNAPLKLSSNSCSPGDP 44
>SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1
Query: 36 ILVPNSCSPGDP 1
ILV NSCSPGDP
Sbjct: 8 ILVSNSCSPGDP 19
>SB_19926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 99 RTTNKCLFLETKIKLPTKNI*ILVPNSCSPGDP 1
R+ NK L K+ + N+ +L NSCSPGDP
Sbjct: 70 RSANK---LMRKLAVDASNL-LLTSNSCSPGDP 98
>SB_742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 2 GSPGLQEFGTRIYIFFVGNLIFV 70
GSPGLQEF + + NL+FV
Sbjct: 16 GSPGLQEFDEYLLLTVSANLVFV 38
>SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 36 ILVPNSCSPGDP 1
+LV NSCSPGDP
Sbjct: 16 LLVSNSCSPGDP 27
>SB_55041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 66 KIKLPTKNI*ILVPNSCSPGDP 1
K+K KN + NSCSPGDP
Sbjct: 37 KLKASKKNF--FISNSCSPGDP 56
>SB_46116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -2
Query: 59 NYQQ-KIYKSSCRIPAARGI 3
NYQ+ K Y S+ RIPAARGI
Sbjct: 149 NYQETKKYYSNYRIPAARGI 168
>SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 57 LPTKNI*ILVPNSCSPGDP 1
L K+ +LV NSCSPGDP
Sbjct: 18 LALKSRPMLVSNSCSPGDP 36
>SB_14826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 60 KLPTKNI*ILVPNSCSPGDP 1
K+P + ++ NSCSPGDP
Sbjct: 19 KIPFTTLPLVPSNSCSPGDP 38
>SB_7555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 90 NKCLFLETKIKLPTKNI*ILVPNSCSPGDP 1
N L T+I K + NSCSPGDP
Sbjct: 31 NGSKLLTTRIHYENKRRVYVTSNSCSPGDP 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,252,056
Number of Sequences: 59808
Number of extensions: 70915
Number of successful extensions: 1644
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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