Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0553
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118315-1|AAM48344.1|  666|Drosophila melanogaster GM14009p pro...    54   2e-07
AE014134-2453|AAF53368.1|  666|Drosophila melanogaster CG4501-PA...    54   2e-07
AY122187-1|AAM52699.1|  826|Drosophila melanogaster LD43341p pro...    31   0.92 
AE013599-1360|AAF58605.3|  826|Drosophila melanogaster CG8981-PB...    31   0.92 

>AY118315-1|AAM48344.1|  666|Drosophila melanogaster GM14009p
           protein.
          Length = 666

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = +3

Query: 462 GLLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLG 605
           GLL RT   Y +  AL TK     +H +TYKQY+ +V  +AKAF+KLG
Sbjct: 50  GLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 404 VKLRIAPRGLAAEPPISVPGITK 472
           VK+R+A  G+ AE PISVPG+ K
Sbjct: 31  VKIRMAKDGIGAEEPISVPGLLK 53


>AE014134-2453|AAF53368.1|  666|Drosophila melanogaster CG4501-PA
           protein.
          Length = 666

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = +3

Query: 462 GLLSRTTARYPNATALATKKADGKWHKITYKQYQDRVRIIAKAFLKLG 605
           GLL RT   Y +  AL TK     +H +TYKQY+ +V  +AKAF+KLG
Sbjct: 50  GLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 404 VKLRIAPRGLAAEPPISVPGITK 472
           VK+R+A  G+ AE PISVPG+ K
Sbjct: 31  VKIRMAKDGIGAEEPISVPGLLK 53


>AY122187-1|AAM52699.1|  826|Drosophila melanogaster LD43341p
           protein.
          Length = 826

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 321 SQSTNILKRTGSSSARRKLHNSNSWDVTSNFASP 422
           + S    K+T +SS RR LH+SN  D  S  A+P
Sbjct: 21  ASSAAAAKKTAASSTRRPLHDSNLGDFRSKAAAP 54


>AE013599-1360|AAF58605.3|  826|Drosophila melanogaster CG8981-PB,
           isoform B protein.
          Length = 826

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 321 SQSTNILKRTGSSSARRKLHNSNSWDVTSNFASP 422
           + S    K+T +SS RR LH+SN  D  S  A+P
Sbjct: 21  ASSAAAAKKTAASSTRRPLHDSNLGDFRSKAAAP 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,916,447
Number of Sequences: 53049
Number of extensions: 549684
Number of successful extensions: 1615
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)