Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0552
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.43 
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    23   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.3  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 381 NIVTIYYRLYKNRYSVYFERDSVI 310
           N   IYY+L K + SV+F    VI
Sbjct: 164 NFERIYYKLTKKKLSVFFGNKPVI 187



 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -1

Query: 269 ATLSYMFSNWSTRRLVLPLRISRSVLYLSRPLADVL 162
           A + Y+F+ +     +LP+ I+  VLY +R LA+V+
Sbjct: 129 AVIDYLFTVY-----LLPIIINPLVLYEARKLANVV 159


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 116 VPRRN*RDGHGQDPPRERP 172
           VP+R     HG  PP+ERP
Sbjct: 20  VPQRLRIRHHGDKPPQERP 38


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 187 CLVPWRTFSRWIL 149
           CL+P+R F  WI+
Sbjct: 302 CLIPFRVFILWII 314


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 341 IQFILSAIL*FMCRVQVSSLQSAPATLSYMFSNWSTR 231
           IQF +SA   FM R       S    LSY+++ +S +
Sbjct: 65  IQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRK 101


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 112 ARSCFSALSWLCTRSFFSAKVVLASTGSTRSSSCRI 5
           +  C    SW   + F+S  ++  S   T +S  RI
Sbjct: 217 SEKCNLTFSWYSKKVFYSKIIISGSIFMTTTSFYRI 252


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 341 IQFILSAIL*FMCRVQVSSLQSAPATLSYMFSNWSTR 231
           IQF +SA   FM R       S    LSY+++ +S +
Sbjct: 21  IQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRK 57


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 187 CLVPWRTFSRWIL 149
           CL+P+R  + WI+
Sbjct: 304 CLLPFRALTFWII 316


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 143 HGQDPPRERPP 175
           H Q PP ++PP
Sbjct: 199 HQQGPPHQQPP 209


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 143 HGQDPPRERPP 175
           H Q PP ++PP
Sbjct: 201 HQQGPPHQQPP 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,296
Number of Sequences: 336
Number of extensions: 2403
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)