Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0552
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     26   0.70 
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    24   2.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   3.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   3.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   3.8  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   5.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.7  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 324 RDSVIYVSCAGQLPTVSAGDVKLH 253
           +D V+YV   G+  T SAGD + H
Sbjct: 245 KDQVLYVGSMGKEWTTSAGDFETH 268


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 301 VCRSAPYSQRRRR*VTCSRTGRRDVWCCP 215
           VCR     +R  R   CS +    + CCP
Sbjct: 34  VCRPYSKCKRGNRITVCSYSATEAIVCCP 62


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -1

Query: 464 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 324
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 538 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 584


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -1

Query: 464 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 324
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 538 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 584


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -1

Query: 464 THPSSKIRTALSHCSY*LILNDNLENTKISLQFTIDCTKIDIQFILS 324
           T+P   +RT  +H    L +   + N   S  + I C    I   LS
Sbjct: 516 TYPMIGLRTGATHYLTTLFIVTLVANVSTSFGYLISCASSSISMALS 562


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 493 YFIYATLFNLHTRARRYELLL 431
           +FI  TLF L T + RY+ LL
Sbjct: 284 FFINITLFALFTLSLRYDRLL 304


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 54  LAEKNERVHNQLKALKQDLAQ-SRDETKE 137
           L E+++ ++ +L  LKQ LAQ S  +TKE
Sbjct: 713 LKEQHDMLNYELNNLKQRLAQTSFQQTKE 741


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 262 NVAGADCRELTCTRHINHRIALKIN*ISIFVQSIVNCNDILVFSKLS 402
           N+AG       CT  ++ + A +    S +    V C ++ +F + S
Sbjct: 74  NIAGNSTEAFICTPVLSRQRATRAPTTSTWTSKSVLCEELFLFLRRS 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,500
Number of Sequences: 2352
Number of extensions: 8777
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)