Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0551
         (513 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3JA15 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_Q54GG2 Cluster: Putative uncharacterized protein phg1c;...    32   6.7  
UniRef50_Q38A44 Cluster: Adiponectin receptor protein 1; n=1; Tr...    32   8.8  

>UniRef50_Q3JA15 Cluster: Putative uncharacterized protein; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: Putative
           uncharacterized protein - Nitrosococcus oceani (strain
           ATCC 19707 / NCIMB 11848)
          Length = 1080

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +3

Query: 3   IEVEIFSAIRNNQTIKSIL*RDKLIHXXXXXXXXXXXIFGLRTSLDLFVKYTFFGLGLYN 182
           IEV I  AI   + IK ++   K+I             F   T +D  V   FF LGL  
Sbjct: 300 IEVTIEEAIDIEKAIKKVIESKKVIESPATGGLILDKAFSDATDID--VTKPFFPLGLQP 357

Query: 183 SKGAIYYF 206
             G+++YF
Sbjct: 358 QPGSVFYF 365


>UniRef50_Q54GG2 Cluster: Putative uncharacterized protein phg1c;
           n=2; Dictyostelium discoideum|Rep: Putative
           uncharacterized protein phg1c - Dictyostelium discoideum
           AX4
          Length = 655

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 129 TSLDLFVKYTFFGLGLYNSKG-AIYYFQLSFVN*LLLALFTSKTNF 263
           T L  F+ + +FG+    ++G   YYF  S V  +L++LF S   F
Sbjct: 593 TGLYTFIYFIYFGITRIETEGVGFYYFMFSLVFSILVSLFCSSIGF 638


>UniRef50_Q38A44 Cluster: Adiponectin receptor protein 1; n=1;
           Trypanosoma brucei|Rep: Adiponectin receptor protein 1 -
           Trypanosoma brucei
          Length = 307

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +1

Query: 154 THFLGWVSIILKERYIIFN*VLSINYCWHCLRLRQTFIYRL*QYDIQKIYNLYSVSEPRF 333
           TH  G+V  +L    +  N VL+  Y WHC+         L       +Y+L+   E   
Sbjct: 79  THAFGFVVFVLLSILLFTNVVLAREYVWHCVVYGGFSFACLMCMLCSTVYHLFMCHENEA 138

Query: 334 VCLYVAMM 357
           V L+V ++
Sbjct: 139 VSLFVELV 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,407,720
Number of Sequences: 1657284
Number of extensions: 8451138
Number of successful extensions: 13645
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13643
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)