Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0551
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_04_0015 + 7586705-7587218,7587294-7588063,7588243-7588278,758...    28   5.1  
04_03_0025 - 9630220-9630783,9630957-9631355,9632039-9632177,963...    28   5.1  
03_05_1105 + 30438140-30438350,30438448-30438926                       27   6.7  
10_01_0107 + 1320768-1321811                                           27   8.8  
04_01_0559 - 7175828-7176195,7176262-7176973,7178028-7178201,717...    27   8.8  
02_05_0364 + 28304743-28304814,28305021-28305197,28307309-283074...    27   8.8  

>10_04_0015 +
           7586705-7587218,7587294-7588063,7588243-7588278,
           7588591-7588662
          Length = 463

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 340 GRRNEVRLPNTSYISFECHTAII 272
           G  NE+ LPN  Y  + CH  II
Sbjct: 217 GCTNEIPLPNAGYHLYNCHELII 239


>04_03_0025 -
           9630220-9630783,9630957-9631355,9632039-9632177,
           9632532-9632766,9632971-9633478
          Length = 614

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 340 GRRNEVRLPNTSYISFECHTAII 272
           G  NE+ LPNT Y  + CH   I
Sbjct: 573 GCTNEIPLPNTGYHLYNCHELTI 595


>03_05_1105 + 30438140-30438350,30438448-30438926
          Length = 229

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 198 YYFQLSFVN*LLLALFTSKTNF 263
           YY+Q   VN LLLALFT+  +F
Sbjct: 77  YYYQRHPVNLLLLALFTAAISF 98


>10_01_0107 + 1320768-1321811
          Length = 347

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 340 GRRNEVRLPNTSYISFECHTAII 272
           G +NE+ LPN  Y  + CH   I
Sbjct: 301 GCKNEIPLPNAGYHLYNCHELTI 323


>04_01_0559 -
           7175828-7176195,7176262-7176973,7178028-7178201,
           7178814-7178891
          Length = 443

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 331 NEVRLPNTSYISFECHTAII 272
           NE+ LPNT Y  + CH   I
Sbjct: 292 NEIPLPNTGYHLYNCHELTI 311


>02_05_0364 +
           28304743-28304814,28305021-28305197,28307309-28307431,
           28307644-28308043,28308129-28308242,28308359-28308454,
           28308598-28308791
          Length = 391

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +1

Query: 4   SKWRSFQRFVII-KRSKVSY 60
           S W+SF R++II KRS++SY
Sbjct: 372 SAWKSFIRYLIINKRSRLSY 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,954,677
Number of Sequences: 37544
Number of extensions: 214311
Number of successful extensions: 335
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)