BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0550
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 33 0.84
AL834382-1|CAD39045.1| 505|Homo sapiens hypothetical protein pr... 32 1.1
AK055043-1|BAB70843.1| 139|Homo sapiens protein ( Homo sapiens ... 31 1.9
EF064734-1|ABK41917.1| 429|Homo sapiens Fc receptor-like 1 prot... 29 7.8
BC033690-1|AAH33690.1| 429|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AY043464-1|AAK91777.1| 429|Homo sapiens Fc receptor-like protei... 29 7.8
AL833970-1|CAD38815.1| 199|Homo sapiens hypothetical protein pr... 29 7.8
AL356276-3|CAH73054.1| 429|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AL356276-2|CAH73052.1| 366|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AL356276-1|CAH73053.1| 428|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AL139409-3|CAH70234.1| 429|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AL139409-2|CAH70232.1| 366|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AL139409-1|CAH70233.1| 428|Homo sapiens Fc receptor-like 1 prot... 29 7.8
AK096690-1|BAC04842.1| 366|Homo sapiens protein ( Homo sapiens ... 29 7.8
AF459634-1|AAL60250.1| 429|Homo sapiens immunoglobulin superfam... 29 7.8
AF329488-1|AAL23898.1| 428|Homo sapiens IFGP1 protein. 29 7.8
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.84
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +1
Query: 166 TIPRDTLTGNTPKSVTAAES*EENSRTSTHVTRVGQWTTWLTRKASIRY*ATCLQSTQLT 345
T P TL ++T + E + ++ + V TT +T SI + + T
Sbjct: 60 TTPLSTLVTTLLTTITRSTPTSETTYPTSPTSIVSDSTTEITYSTSITGTLSTATTLPPT 119
Query: 346 LNPLPWLKTGTSSYTPRLLKSTPNIHILMKPAF 444
+ LP +T T + T L+ +TPN P+F
Sbjct: 120 SSSLPTTETATMTPTTTLITTTPNTTSHSTPSF 152
>AL834382-1|CAD39045.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 409 CSSAILEYSWKCLSLAKATDSESAGCSGGTSLSIGW 302
C+S +L+ +W+C S T + SA CSG T + W
Sbjct: 332 CTSRMLKLTWRCASCRTFTPTFSA-CSGATVYAASW 366
>AK055043-1|BAB70843.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ30481 fis, clone BRAWH1000180. ).
Length = 139
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 166 TIPRDTLTGNTPKSVTAAES*EENSRTSTHVTRVGQWTTW 285
T+PR TL G +PK + ++ + R S H+ GQ W
Sbjct: 7 TVPRRTLPGQSPKPLVRSQFPLDRRRPSIHLIGQGQTLLW 46
>EF064734-1|ABK41917.1| 429|Homo sapiens Fc receptor-like 1
protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>BC033690-1|AAH33690.1| 429|Homo sapiens Fc receptor-like 1
protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AY043464-1|AAK91777.1| 429|Homo sapiens Fc receptor-like protein 1
protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL833970-1|CAD38815.1| 199|Homo sapiens hypothetical protein
protein.
Length = 199
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 42 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 82
>AL356276-3|CAH73054.1| 429|Homo sapiens Fc receptor-like 1
protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL356276-2|CAH73052.1| 366|Homo sapiens Fc receptor-like 1
protein.
Length = 366
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL356276-1|CAH73053.1| 428|Homo sapiens Fc receptor-like 1
protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL139409-3|CAH70234.1| 429|Homo sapiens Fc receptor-like 1
protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL139409-2|CAH70232.1| 366|Homo sapiens Fc receptor-like 1
protein.
Length = 366
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AL139409-1|CAH70233.1| 428|Homo sapiens Fc receptor-like 1
protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AK096690-1|BAC04842.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ39371 fis, clone PEBLM2007598, moderately
similar to Mus musculus immunoglobulin scavenger
receptor IgSR mRNA. ).
Length = 366
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AF459634-1|AAL60250.1| 429|Homo sapiens immunoglobulin superfamily
receptor translocation associated 5 protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
>AF329488-1|AAL23898.1| 428|Homo sapiens IFGP1 protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 54 THSFWCWLQA*PVATCLTSRRPRLTLHRSPTCSPILLDDSPG 179
T S+WC Q + L SRR ++ +HR P L PG
Sbjct: 81 TGSYWCEAQT-MASKVLRSRRSQINVHRVPVADVSLETQPPG 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,917,159
Number of Sequences: 237096
Number of extensions: 1862689
Number of successful extensions: 9665
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9661
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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