Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0550
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    29   1.6  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z82268-11|CAB05203.1|  262|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical p...    29   2.1  
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ...    29   2.1  
AL021476-2|CAA16318.1|  262|Caenorhabditis elegans Hypothetical ...    29   2.1  
AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    29   2.8  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    27   6.4  
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...    27   6.4  

>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 166 TIPRDTLTGNTPKSVTAAES*EENSRTSTHVTRVGQWTTWLTRKASI 306
           T P+ T T   P + T  ES   ++  S   TR+  W T+ TR  S+
Sbjct: 130 TQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTW-TYTTRYPSV 175


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 166 TIPRDTLTGNTPKSVTAAES*EENSRTSTHVTRVGQWTTWLTRKASI 306
           T P+ T T   P + T  ES   ++  S   TR+  W T+ TR  S+
Sbjct: 130 TQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTW-TYTTRYPSV 175


>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>Z82268-11|CAB05203.1|  262|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1b protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>Z82268-10|CAB05202.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1c protein.
          Length = 1210

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>AL021476-2|CAA16318.1|  262|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1b protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>AL021476-1|CAA16317.1|  972|Caenorhabditis elegans Hypothetical
           protein Y37A1C.1a protein.
          Length = 972

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 231 GKFAYVDPRHKGRTVDYVADKEGFHPILSDVPPEHPADSESVALAKDRHFQLYSK 395
           G+F      + G+ V  VAD+ G      DVP + PA+    + AK  HF +  K
Sbjct: 83  GRFMVTSDTNPGQLVAEVADELGI-----DVPIDPPAEKSPASRAKGVHFSVGDK 132


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 418 CWACSSAILEYSWKCLSLAKATDSESAGCSGG 323
           C A S+A    +WK +  ++A +SE  GC  G
Sbjct: 12  CLALSAADCPAAWKAILNSQAEESEDNGCEAG 43


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +3

Query: 315 SDVPPEHPADSESVALA-KDRHFQLYSKIAEEHAQHPHPYETSVPRQSAAVAEATLKHSE 491
           +++P      +  +AL    ++FQ + K+  E    P PY  +VP  S      T K  +
Sbjct: 415 TEIPQPSYLQNPRIALVTSQQNFQHFPKLMNEQRASPGPYFRTVPSPSEYDEPTTTKKPK 474

Query: 492 LFRV 503
           +  V
Sbjct: 475 IVTV 478


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
           protein.
          Length = 852

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 156 ILLDDSPGHVDREHTEVSDGSGVVRGKFAYVD 251
           I L DSPGHVD   +EV+   GV  G    VD
Sbjct: 112 INLIDSPGHVDFS-SEVTAALGVTDGALVVVD 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,760,720
Number of Sequences: 27780
Number of extensions: 276708
Number of successful extensions: 1058
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)